RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 AVPR1BP47901 424 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 ADARP55265 1226 aaKnown RBP9.13□□□□□ -0.95
CCM2-210ENST00000478169 EIF3BP55884 814 aaKnown RBP9.13□□□□□ -0.95
CCM2-210ENST00000478169 ABATP80404 500 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 PMP22Q01453 160 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 ALDH6A1Q02252 535 aaKnown RBP9.13□□□□□ -0.95
CCM2-210ENST00000478169 PTK6Q13882 451 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 OASLQ15646 514 aaKnown RBP9.13□□□□□ -0.95
CCM2-210ENST00000478169 SYT16Q17RD7 645 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 CTSL3PQ5NE16 218 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 ACER2Q5QJU3 275 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 ICE2Q659A1 982 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 SUSD1Q6UWL2 747 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 CPEB2Q7Z5Q1 589 aaKnown RBP9.13□□□□□ -0.95
CCM2-210ENST00000478169 BEST3Q8N1M1 668 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 MDS2Q8NDY4 140 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 MCOLN3Q8TDD5 553 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 BIRC8Q96P09 236 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 PANX2Q96RD6 677 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 CYTH2Q99418 400 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 VN1R1Q9GZP7 353 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 LACRTQ9GZZ8 138 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 SYNPO2LQ9H987 977 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 RAB6BQ9NRW1 208 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 FAM114A2Q9NRY5 505 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 NAV3Q8IVL0 2385 aa9.13□□□□□ -0.95
CCM2-210ENST00000478169 DNAJC13O75165 2243 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 A0A0U1RQJ8 604 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 SOWAHDA6NJG2 315 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 ARHGEF33A8MVX0 844 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 C19orf84I3L1E1 186 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 AP3B1O00203 1094 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 LIASO43766 372 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 SEC24DO94855 1032 aaPredicted RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 NSA2O95478 260 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 ESR1P03372 595 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 CATP04040 527 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 APRTP07741 180 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 CD46P15529 392 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 EEF1DP29692 281 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 FMO4P31512 558 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 KIR3DL1P43629 444 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 AGTR2P50052 363 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 EFNA3P52797 238 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 PNLIPRP1P54315 467 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 MAT1AQ00266 395 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 TSTA3Q13630 321 aaPredicted RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 TUBA3CQ13748 450 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 CDSNQ15517 529 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 EXT1Q16394 746 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 MEP1AQ16819 746 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 BTBD16Q32M84 506 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 KRTAP21-3Q3LHN1 58 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 RNF187Q5TA31 235 aaPredicted RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 MRNIPQ6NTE8 343 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 TUBA3EQ6PEY2 450 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 PCGF5Q86SE9 256 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 SDCCAG8Q86SQ7 713 aaPredicted RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 CEP97Q8IW35 865 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 EID3Q8N140 333 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 HORMAD2Q8N7B1 307 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 TMEM178AQ8NBL3 297 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 ACBD4Q8NC06 268 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 FAM98AQ8NCA5 519 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 M1APQ8TC57 530 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 PHF10Q8WUB8 498 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 CHTF18Q8WVB6 975 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 ATG4AQ8WYN0 398 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 SCMH1Q96GD3 660 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 TCF12Q99081 682 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 EBNA1BP2Q99848 306 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 UTP23Q9BRU9 249 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 TRIM5Q9C035 493 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 IL22Q9GZX6 179 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 ENKD1Q9H0I2 346 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 TSPY26PQ9H489 355 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 KCNK13Q9HB14 408 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 MCCC2Q9HCC0 563 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 EIF2B3Q9NR50 452 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 PAK5Q9P286 719 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 TAC3Q9UHF0 121 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 PCYOX1Q9UHG3 505 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 PACSIN2Q9UNF0 486 aaPredicted RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 ZNF148Q9UQR1 794 aa9.12□□□□□ -0.95
CCM2-210ENST00000478169 REXO2Q9Y3B8 237 aaKnown RBP9.12□□□□□ -0.95
CCM2-210ENST00000478169 PHF3Q92576 2039 aaKnown RBP9.11□□□□□ -0.95
CCM2-210ENST00000478169 IGHV3-20A0A0C4DH32 117 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 E7ENX8 843 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 NPIPA5E9PKD4 350 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 FAM227AF5H4B4 570 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 P2RX6O15547 441 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 ASNA1O43681 348 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 NIPSNAP2O75323 286 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 CHRM3P20309 590 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 HRH2P25021 359 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 NMBRP28336 390 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 CD96P40200 585 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 NPY2RP49146 381 aa9.11□□□□□ -0.95
CCM2-210ENST00000478169 SESN2P58004 480 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms