RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 OR2A1Q8NGT9 310 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 OR9A4Q8NGU2 314 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 ZCCHC10Q8TBK6 192 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 MCOLN3Q8TDD5 553 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 MVB12AQ96EY5 273 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 C14orf79Q96F83 325 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF778Q96MU6 729 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 MCCC2Q9HCC0 563 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 SPATA7Q9P0W8 599 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 MARCH4Q9P2E8 410 aaPredicted RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 EFR3BQ9Y2G0 817 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 PCDHGB6Q9Y5F9 930 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 PHF3Q92576 2039 aaKnown RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 NF1P21359 2839 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 EML6Q6ZMW3 1958 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 LOC102723996A0A087X1L8 192 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 A0A1W2PPV9 198 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 OR2A25A4D2G3 310 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 NKX2-6A6NCS4 301 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 OR2W5A6NFC9 320 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ERI2A8K979 691 aaKnown RBP6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 GABRR3A8MPY1 467 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 TXNDC9O14530 226 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 HAT1O14929 419 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 TFECO14948 347 aaPredicted RBP6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 P2RX6O15547 441 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ASNA1O43681 348 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 PHF2O75151 1096 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 NIPSNAP2O75323 286 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 SUN1O94901 812 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 EZRP15311 586 aaKnown RBP6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 CD1EP15812 388 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 IL1RNP18510 177 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 CHRM3P20309 590 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ADRA1DP25100 572 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 CD96P40200 585 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 GRIA1P42261 906 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 XCR1P46094 333 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 TERF1P54274 439 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 PNLIPRP1P54315 467 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 TAS2R50P59544 299 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 CRADDP78560 199 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 MYBPHQ13203 477 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 PRTGQ2VWP7 1150 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ANKRD20A4Q4UJ75 823 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 GARNL3Q5VVW2 1013 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ICE2Q659A1 982 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 FBXO42Q6P3S6 717 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 TMEM205Q6UW68 189 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 SPNS3Q6ZMD2 512 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF534Q76KX8 674 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 PEX26Q7Z412 305 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 PAQR7Q86WK9 346 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 CYP4X1Q8N118 509 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 CPSF7Q8N684 471 aaKnown RBP6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 SLC5A8Q8N695 610 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 HORMAD2Q8N7B1 307 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 UBL4BQ8N7F7 174 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 OR9A1PQ8NGU1 263 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ADAMTS18Q8TE60 1221 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 THAP3Q8WTV1 239 aaPredicted RBP6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ATG4AQ8WYN0 398 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 SMPDL3AQ92484 453 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ALG3Q92685 438 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 IMMP1LQ96LU5 166 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 FRMD6Q96NE9 622 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 CYTH2Q99418 400 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 SPOCK3Q9BQ16 436 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF559Q9BR84 538 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 PLCD4Q9BRC7 762 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 VN1R1Q9GZP7 353 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 ETNK1Q9HBU6 452 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 FAM114A2Q9NRY5 505 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 LRFN1Q9P244 771 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 AMFRQ9UKV5 643 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 PACSIN2Q9UNF0 486 aaPredicted RBP6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 TCAF1Q9Y4C2 921 aa6.31□□□□□ -1.4
RTFDC1-206ENST00000477485 A0A1W2PQ72 361 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 SOWAHDA6NJG2 315 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF839A8K0R7 811 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 ARHGEF33A8MVX0 844 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 GOLGA8KD6RF30 607 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 GOLGA8TH3BQL2 631 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 SGK494L7N484 410 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 SMAPO00193 183 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 NDC80O14777 642 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 PFDN6O15212 129 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 FOXS1O43638 330 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 MAN1A2O60476 641 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 SLC25A12O75746 678 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 ZWINTO95229 277 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 CATP04040 527 aaKnown RBP6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 APRTP07741 180 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 SP1P08047 785 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 CD99P14209 185 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 PTGER1P34995 402 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 FDFT1P37268 417 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 RFC3P40938 356 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 EFNA3P52797 238 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 EMP3P54852 163 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms