RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PCDHGA6Q9Y5G7 932 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 PCDHGA4Q9Y5G9 962 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 PKD1L2Q7Z442 2459 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 NCF1BA6NI72 391 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-206ENST00000474828 NCF1CA8MVU1 366 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-206ENST00000474828 H0YGG7 62 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 K7EPI3 171 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 MEN1O00255 615 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 EFSO43281 561 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 WFS1O76024 890 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 WDR47O94967 919 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 RECKO95980 971 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 NTRK1P04629 796 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 CAPN1P07384 714 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 PYGBP11216 843 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 NCF1P14598 390 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-206ENST00000474828 CRHR1P34998 444 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 SLCO1A2P46721 670 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 HSPA7P48741 367 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 ARSFP54793 590 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 ARF3P61204 181 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-206ENST00000474828 REEP5Q00765 189 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 TSTA3Q13630 321 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-206ENST00000474828 GRM7Q14831 915 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 TNFAIP8L3Q5GJ75 292 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 WASHC2DQ5SRD0 308 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 MANEAQ5SRI9 462 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 CATSPEREQ5SY80 951 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 BEND6Q5SZJ8 279 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-206ENST00000474828 CACNA2D3Q8IZS8 1091 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 GALNT6Q8NCL4 622 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 SEC16BQ96JE7 1060 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 LHX9Q9NQ69 397 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 WWOXQ9NZC7 414 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 TMEM216Q9P0N5 145 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 DCDC2Q9UHG0 476 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 PADI1Q9ULC6 663 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 TNPO3Q9Y5L0 923 aaKnown RBP16.18■□□□□ 0.18
SCAF11-206ENST00000474828 URB1O60287 2271 aaKnown RBP16.18■□□□□ 0.18
SCAF11-206ENST00000474828 FAM208BQ5VWN6 2430 aa16.18■□□□□ 0.18
SCAF11-206ENST00000474828 A0A0J9YVX5 310 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 TEX51A0A1B0GUA7 166 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 SUPT3HB4E1H0 165 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 TK2O00142 265 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 TXNDC9O14530 226 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 LCMT2O60294 686 aaKnown RBP16.17■□□□□ 0.18
SCAF11-206ENST00000474828 SUPT3HO75486 399 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 C1GALT1C1LP0DN25 315 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 AHRP35869 848 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 BCL6P41182 706 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 SCTRP47872 440 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 AGTR2P50052 363 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 ATP1A2P50993 1020 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 UCNP55089 124 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 ZNF844Q08AG5 666 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 PDK4Q16654 411 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 FAM214AQ32MH5 1076 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 CRTC2Q53ET0 693 aaPredicted RBP16.17■□□□□ 0.18
SCAF11-206ENST00000474828 GARNL3Q5VVW2 1013 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 TRABD2AQ86V40 505 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 MFSD9Q8NBP5 474 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 ESAMQ96AP7 390 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 SPNS1Q9H2V7 528 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 AKIRIN1Q9H9L7 192 aaPredicted RBP16.17■□□□□ 0.18
SCAF11-206ENST00000474828 EMCNQ9ULC0 261 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 PLAAQ9Y263 795 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 DYRK1BQ9Y463 629 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 ANKRD12Q6UB98 2062 aa16.17■□□□□ 0.18
SCAF11-206ENST00000474828 LOC101059948A0A1B0GTJ6 334 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 C21orf140B9A014 251 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 E2F3O00716 465 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 KLK10O43240 276 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 GLRA3O75311 464 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 MED26O95402 600 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 S100BP04271 92 aaPredicted RBP16.16■□□□□ 0.18
SCAF11-206ENST00000474828 RAB40ALP0C0E4 278 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 ITGAXP20702 1163 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 GSTM2P28161 218 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 VSX2P58304 361 aaPredicted RBP16.16■□□□□ 0.18
SCAF11-206ENST00000474828 FAM53BQ14153 422 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 PFKFB4Q16877 469 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 PLD3Q8IV08 490 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 ZNF655Q8N720 491 aaPredicted RBP16.16■□□□□ 0.18
SCAF11-206ENST00000474828 ZNF740Q8NDX6 193 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 N4BP2L2Q92802 583 aaPredicted RBP16.16■□□□□ 0.18
SCAF11-206ENST00000474828 ALKBH8Q96BT7 664 aaKnown RBP16.16■□□□□ 0.18
SCAF11-206ENST00000474828 MVB12AQ96EY5 273 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 C10orf90Q96M02 699 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 TSNARE1Q96NA8 513 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 CCNL2Q96S94 520 aaPredicted RBP16.16■□□□□ 0.18
SCAF11-206ENST00000474828 GEMIN8Q9NWZ8 242 aaKnown RBP16.16■□□□□ 0.18
SCAF11-206ENST00000474828 TSC22D4Q9Y3Q8 395 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 CACNA1GO43497 2377 aa16.16■□□□□ 0.18
SCAF11-206ENST00000474828 LOC400499M0QZD8 3231 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 HYKKA2RU49 373 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 FOXO6A8MYZ6 492 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 DSCR3O14972 297 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 P2RX6O15547 441 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 ERLIN1O75477 346 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 CCNYL3P0C7X3 344 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms