RNA–Protein interactions for RNA: ENST00000473095.1

CHCHD2-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

TSL 1 (best)

Gene CHCHD2, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-202ENST00000473095 MKL2Q9ULH7 1088 aa12.66□□□□□ -0.38
CHCHD2-202ENST00000473095 RUVBL2Q9Y230 463 aaKnown RBP12.66□□□□□ -0.38
CHCHD2-202ENST00000473095 NAV3Q8IVL0 2385 aa12.66□□□□□ -0.38
CHCHD2-202ENST00000473095 IGKV1-8A0A0C4DH67 115 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 ASPDHA6ND91 283 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 VPS26AO75436 327 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 MLYCDO95822 493 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 CYC1P08574 325 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 ANXA5P08758 320 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 C8orf89P0DMQ9 161 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 TTPAP49638 278 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 PRAMEP78395 509 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 RELAQ04206 551 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 TLE4Q04727 773 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 KLF1Q13351 362 aaPredicted RBP12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 FAM53BQ14153 422 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 SYT16Q17RD7 645 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 PLAG1Q6DJT9 500 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 LDB1Q86U70 411 aaPredicted RBP12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 PAQR7Q86WK9 346 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 CEP97Q8IW35 865 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 UBL4BQ8N7F7 174 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 GSDMBQ8TAX9 411 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 MAGEC3Q8TD91 643 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 PHF10Q8WUB8 498 aaKnown RBP12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 SCMH1Q96GD3 660 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 ZNF354BQ96LW1 612 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 PANX3Q96QZ0 392 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 OR2A5Q96R48 311 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 TMEM121Q9BTD3 319 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 ACAT2Q9BWD1 397 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 DRC3Q9H069 523 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 CATSPERZQ9NTU4 200 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 R3HDM2Q9Y2K5 976 aaKnown RBP12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 TCAF1Q9Y4C2 921 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 SAR1BQ9Y6B6 198 aa12.65□□□□□ -0.38
CHCHD2-202ENST00000473095 A0A0A6YYC8 382 aaPredicted RBP12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 I3L1I5 382 aaPredicted RBP12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 TTI1O43156 1089 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 SEC24DO94855 1032 aaPredicted RBP12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 MATN4O95460 622 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 TCP1P17987 556 aaKnown RBP12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 RPS3P23396 243 aaKnown RBP eCLIP12.64□□□□□ -0.393e-11■■■■■ 38.9
CHCHD2-202ENST00000473095 GRIA1P42261 906 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 TUBA3CQ13748 450 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 GBX1Q14549 363 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 ACER2Q5QJU3 275 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 PTRHD1Q6GMV3 140 aaKnown RBP12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 ZNF425Q6IV72 752 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 TUBA3EQ6PEY2 450 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 OTOAQ7RTW8 1153 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 SIAH3Q8IW03 269 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 CHERPQ8IWX8 916 aaKnown RBP12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 BEST3Q8N1M1 668 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 CHTF18Q8WVB6 975 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 SKA2Q8WVK7 121 aaPredicted RBP12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 POM121Q96HA1 1249 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 CAPZA3Q96KX2 299 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 FOPNLQ96NB1 174 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 FRMD6Q96NE9 622 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 SIGLEC12Q96PQ1 595 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 VN1R1Q9GZP7 353 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 MRPS30Q9NP92 439 aaKnown RBP12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 GNPTGQ9UJJ9 305 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 ANAPC5Q9UJX4 755 aa12.64□□□□□ -0.39
CHCHD2-202ENST00000473095 HCFC1P51610 2035 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 A8MUI8 341 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 FAM227AF5H4B4 570 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 TXNDC9O14530 226 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 CD3EAPO15446 510 aaKnown RBP12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 PKMP14618 531 aaKnown RBP12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 EZRP15311 586 aaKnown RBP12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 CD96P40200 585 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 CSNK1G2P78368 415 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 MAT1AQ00266 395 aaKnown RBP12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 ALDH6A1Q02252 535 aaKnown RBP12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 PRDX1Q06830 199 aaKnown RBP12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 BTBD16Q32M84 506 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 FCRLBQ6BAA4 426 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 SUSD1Q6UWL2 747 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 PPP1R21Q6ZMI0 780 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 LANCL3Q6ZV70 420 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 NCCRP1Q6ZVX7 275 aaPredicted RBP12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 CPEB2Q7Z5Q1 589 aaKnown RBP12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 LRRC6Q86X45 466 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 OR9A1PQ8NGU1 263 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 METTL21AQ8WXB1 218 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 SMPDL3AQ92484 453 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 MS4A14Q96JA4 679 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 DMRTA2Q96SC8 542 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 CYTH2Q99418 400 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 NPAS2Q99743 824 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 TRIM51Q9BSJ1 452 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 HES7Q9BYE0 225 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 ETNK1Q9HBU6 452 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 KLHL1Q9NR64 748 aa12.63□□□□□ -0.39
CHCHD2-202ENST00000473095 INTS1Q8N201 2190 aaKnown RBP12.62□□□□□ -0.39
CHCHD2-202ENST00000473095 IGHV3-20A0A0C4DH32 117 aa12.62□□□□□ -0.39
CHCHD2-202ENST00000473095 NPIPA5E9PKD4 350 aa12.62□□□□□ -0.39
CHCHD2-202ENST00000473095 E9PLN8 166 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms