RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TXNDC9O14530 226 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 KLF11O14901 512 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 SRPX2O60687 465 aaPredicted RBP16.17■□□□□ 0.18
CCM2-205ENST00000472223 CSO75390 466 aaKnown RBP16.17■□□□□ 0.18
CCM2-205ENST00000472223 WFS1O76024 890 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 KRT6AP02538 564 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 KRT6BP04259 564 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 VARSP26640 1264 aaKnown RBP16.17■□□□□ 0.18
CCM2-205ENST00000472223 SERPINB1P30740 379 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 LSSP48449 732 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 KRT6CP48668 564 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 EIF3IQ13347 325 aaKnown RBP16.17■□□□□ 0.18
CCM2-205ENST00000472223 CPSF6Q16630 551 aaKnown RBP eCLIP16.17■□□□□ 0.18
CCM2-205ENST00000472223 ISXQ2M1V0 245 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 ARL13AQ5H913 290 aaPredicted RBP16.17■□□□□ 0.18
CCM2-205ENST00000472223 C10orf62Q5T681 223 aaPredicted RBP16.17■□□□□ 0.18
CCM2-205ENST00000472223 CDCP2Q5VXM1 449 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 FCRL6Q6DN72 434 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 ZNF425Q6IV72 752 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 CUZD1Q86UP6 607 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 CACTIN-AS1Q8N1I8 211 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 CHCHD4Q8N4Q1 142 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 L3MBTL4Q8NA19 623 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 RCBTB1Q8NDN9 531 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 OR52B6Q8NGF0 335 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 CKAP2Q8WWK9 683 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 SEC16BQ96JE7 1060 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 SLC41A2Q96JW4 573 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 PPM1MQ96MI6 270 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 ELOVL6Q9H5J4 265 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 NT5DC2Q9H857 520 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 GEMIN8Q9NWZ8 242 aaKnown RBP16.17■□□□□ 0.18
CCM2-205ENST00000472223 SEMA5BQ9P283 1151 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 SH2B3Q9UQQ2 575 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 BTRCQ9Y297 605 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.17■□□□□ 0.18
CCM2-205ENST00000472223 HEATR5BQ9P2D3 2071 aa16.17■□□□□ 0.18
CCM2-205ENST00000472223 A0A0J9YVX5 310 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 FEZF1A0PJY2 475 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 OR4F21O95013 312 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 PCNAP12004 261 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 MDH1P40925 334 aaKnown RBP16.16■□□□□ 0.18
CCM2-205ENST00000472223 YBX1P67809 324 aaKnown RBP16.16■□□□□ 0.18
CCM2-205ENST00000472223 REEP5Q00765 189 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 MEF2AQ02078 507 aaPredicted RBP16.16■□□□□ 0.18
CCM2-205ENST00000472223 FOXM1Q08050 763 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 BST1Q10588 318 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 GGTA1PQ4G0N0 100 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 TCTE1Q5JU00 501 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 TMPRSS9Q7Z410 1059 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 BPHLQ86WA6 291 aaPredicted RBP16.16■□□□□ 0.18
CCM2-205ENST00000472223 FAM129CQ86XR2 697 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 CRLF3Q8IUI8 442 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 MCATQ8IVS2 390 aaKnown RBP16.16■□□□□ 0.18
CCM2-205ENST00000472223 GPR135Q8IZ08 494 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 D2HGDHQ8N465 521 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 CDYL2Q8N8U2 506 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 TRPV3Q8NET8 790 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 AGAP11Q8TF27 550 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 ADAMTS14Q8WXS8 1223 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 MOCOSQ96EN8 888 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 CDK15Q96Q40 435 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 SLC29A3Q9BZD2 475 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 SHCBP1LQ9BZQ2 653 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 RNF11Q9Y3C5 154 aa16.16■□□□□ 0.18
CCM2-205ENST00000472223 SNRNP200O75643 2136 aaKnown RBP16.15■□□□□ 0.18
CCM2-205ENST00000472223 IGKV1-8A0A0C4DH67 115 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 URADA6NGE7 173 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 H0YIV9 168 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 HAT1O14929 419 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 AZIN1O14977 448 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 CASC3O15234 703 aaKnown RBP16.15■□□□□ 0.18
CCM2-205ENST00000472223 ULK1O75385 1050 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 DKK1O94907 266 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 SERPIND1P05546 499 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 CAPN1P07384 714 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 SLC35G6P0C7Q6 338 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 JMJD7P0C870 316 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 UROSP10746 265 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 EPORP19235 508 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 AHRP35869 848 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 ERVPABLB-1P60509 514 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 SH3BP2P78314 561 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 CYP4F3Q08477 520 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 TRAF3Q13114 568 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 ZRSR2Q15696 482 aaKnown RBP16.15■□□□□ 0.18
CCM2-205ENST00000472223 SH2D4BQ5SQS7 431 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 FBXO42Q6P3S6 717 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 MTERF4Q7Z6M4 381 aaKnown RBP16.15■□□□□ 0.18
CCM2-205ENST00000472223 B3GNT8Q7Z7M8 397 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 SYVN1Q86TM6 617 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 CLYBLQ8N0X4 340 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 DCBLD1Q8N8Z6 715 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 MFSD9Q8NBP5 474 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 CAMKVQ8NCB2 501 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 FAR2Q96K12 515 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 CENPKQ9BS16 269 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 SLC7A5P2Q9GIP4 190 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 NMRK1Q9NWW6 199 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 DLL3Q9NYJ7 618 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms