RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 PYGO1Q9Y3Y4 419 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 POMT1Q9Y6A1 747 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 ARID2Q68CP9 1835 aa3.74□□□□□ -1.81
LRCH3-211ENST00000466054 A0A087X002 238 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 C5orf52A6NGY3 159 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 F8VVB4 439 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 F8VWA3 439 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 TEX28O15482 410 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 SERPING1P05155 500 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 ZNF10P21506 573 aaPredicted RBP3.73□□□□□ -1.81
LRCH3-211ENST00000466054 TIA1P31483 386 aaKnown RBP eCLIP3.73□□□□□ -1.816e-7■■■■■ 29.1
LRCH3-211ENST00000466054 NKX2-1P43699 371 aaPredicted RBP3.73□□□□□ -1.81
LRCH3-211ENST00000466054 DNA2P51530 1060 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 SP3Q02447 781 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 SGCGQ13326 291 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 TRIM29Q14134 588 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 ZNF74Q16587 644 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 SGSM1Q2NKQ1 1148 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 ZFP69Q49AA0 526 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 ARMC3Q5W041 872 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 LEKR1Q6ZMV7 388 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 Q6ZSR9 355 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 ANKRD33Q7Z3H0 272 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 CCDC60Q8IWA6 550 aaPredicted RBP3.73□□□□□ -1.81
LRCH3-211ENST00000466054 DCLK2Q8N568 766 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 KLHDC1Q8N7A1 406 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 SLC37A3Q8NCC5 494 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 GATAD1Q8WUU5 269 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 APOBEC4Q8WW27 367 aaKnown RBP3.73□□□□□ -1.81
LRCH3-211ENST00000466054 PYCR2Q96C36 320 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 AK8Q96MA6 479 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 GDAP1L1Q96MZ0 367 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 KRT12Q99456 494 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 ERAP1Q9NZ08 941 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 GTF3C4Q9UKN8 822 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 MRPS28Q9Y2Q9 187 aaKnown RBP3.73□□□□□ -1.81
LRCH3-211ENST00000466054 PPP2R2CQ9Y2T4 447 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 HEG1Q9ULI3 1381 aa3.73□□□□□ -1.81
LRCH3-211ENST00000466054 C17orf105B2RV13 164 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 TMEM150CB9EJG8 249 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 FAM86B1E9PN63 330 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 PSMA7O14818 248 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 SLC30A4O14863 429 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 FCGR3BO75015 233 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 BAG3O95817 575 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 ATP1B1P05026 303 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 FAM86B2P0C5J1 330 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 PRKAR1AP10644 381 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 SFTPDP35247 375 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 PRKCIP41743 596 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 LEPRP48357 1165 aaKnown RBP3.72□□□□□ -1.81
LRCH3-211ENST00000466054 GUCY2DQ02846 1103 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 HNRNPDQ14103 355 aaKnown RBP3.72□□□□□ -1.81
LRCH3-211ENST00000466054 EXT1Q16394 746 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 TAZQ16635 292 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 MPP7Q5T2T1 576 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 BHLHB9Q6PI77 547 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 C11orf88Q6PI97 169 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 TMEM182Q6ZP80 229 aaPredicted RBP3.72□□□□□ -1.81
LRCH3-211ENST00000466054 FAM47EQ6ZV65 393 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 GPR141Q7Z602 305 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 HOGA1Q86XE5 327 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 TICAM2Q86XR7 235 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 OR8H3Q8N146 312 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 LYG1Q8N1E2 194 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 GRK7Q8WTQ7 553 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 DNASE1L2Q92874 299 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 AZIN2Q96A70 460 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 BTBD9Q96Q07 612 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 INTS14Q96SY0 518 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 NDNQ99608 321 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 MLPHQ9BV36 600 aaPredicted RBP3.72□□□□□ -1.81
LRCH3-211ENST00000466054 ZDHHC18Q9NUE0 388 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 PLCXD1Q9NUJ7 323 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 BARHL2Q9NY43 387 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 TMEM181Q9P2C4 612 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 KLHL8Q9P2G9 620 aaPredicted RBP3.72□□□□□ -1.81
LRCH3-211ENST00000466054 CACNG5Q9UF02 275 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 IL36AQ9UHA7 158 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 PRDM4Q9UKN5 801 aa3.72□□□□□ -1.81
LRCH3-211ENST00000466054 ELF5Q9UKW6 265 aaPredicted RBP3.72□□□□□ -1.81
LRCH3-211ENST00000466054 A0A087WUV0 522 aaPredicted RBP3.71□□□□□ -1.82
LRCH3-211ENST00000466054 C15orf61A6NNL5 157 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 FPGTO14772 594 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 FLRT2O43155 660 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 PPIP5K2O43314 1243 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 PRAF2O60831 178 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 ZFAND5O76080 213 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 STAG3L1P0CL83 205 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 GLULP15104 373 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 TYMPP19971 482 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 SOAT1P35610 550 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 PAX9P55771 341 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 PTENP60484 403 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 IL10RBQ08334 325 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 SRSF9Q13242 221 aaKnown RBP eCLIP3.71□□□□□ -1.82
LRCH3-211ENST00000466054 EFTUD2Q15029 972 aaKnown RBP eCLIP3.71□□□□□ -1.82
LRCH3-211ENST00000466054 PTPN14Q15678 1187 aa3.71□□□□□ -1.82
LRCH3-211ENST00000466054 LBHQ53QV2 105 aaPredicted RBP3.71□□□□□ -1.82
LRCH3-211ENST00000466054 FAM166AQ6J272 317 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms