RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, human

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT4-208	ENST00000465721	EZR	P15311	586 aa	Known RBP	11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	RPS3	P23396	243 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	ADRA1D	P25100	572 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	CETN2	P41208	172 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	TTPA	P49638	278 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	ST13	P50502	369 aa	Known RBP	11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	CSNK1G2	P78368	415 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	ALDH6A1	Q02252	535 aa	Known RBP	11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	FAM53B	Q14153	422 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	KRTCAP3	Q53RY4	240 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	CTSL3P	Q5NE16	218 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	SUSD1	Q6UWL2	747 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	PPP1R21	Q6ZMI0	780 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	MEX3B	Q6ZN04	569 aa	Known RBP	11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	OTOA	Q7RTW8	1153 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	CRLF3	Q8IUI8	442 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	LRRC57	Q8N9N7	239 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	TC2N	Q8N9U0	490 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	GSDMB	Q8TAX9	411 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	AGAP11	Q8TF27	550 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	SMPDL3A	Q92484	453 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	MRFAP1L1	Q96HT8	127 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	GPAM	Q9HCL2	828 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	MRPS30	Q9NP92	439 aa	Known RBP	11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	KLHL1	Q9NR64	748 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	PCYOX1	Q9UHG3	505 aa		11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	TSR3	Q9UJK0	312 aa	Known RBP	11.12	□□□□□ -0.63
CNOT4-208	ENST00000465721	ARHGAP21	Q5T5U3	1957 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	TCRBV7S2A1N4T	A0A589	114 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	GOLGA6L9	A6NEM1	432 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721		A8MUI8	341 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	NPIPA5	E9PKD4	350 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	MYO1C	O00159	1063 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	HAT1	O14929	419 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	KPNA5	O15131	536 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	CD3EAP	O15446	510 aa	Known RBP	11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	MAN1A2	O60476	641 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	DIAPH2	O60879	1101 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	MLYCD	O95822	493 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	GAS8	O95995	478 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	IGFBP2	P18065	325 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	ATP5D	P30049	168 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	CD96	P40200	585 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	HSF1	Q00613	529 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	OR1C1	Q15619	314 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	BTBD16	Q32M84	506 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	ICE2	Q659A1	982 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	PRSS41	Q7RTY9	318 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	FGD2	Q7Z6J4	655 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	LRRC6	Q86X45	466 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	MPP5	Q8N3R9	675 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	OR9A1P	Q8NGU1	263 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	OR9A4	Q8NGU2	314 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	MAGEC3	Q8TD91	643 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	ZNF354B	Q96LW1	612 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	FOPNL	Q96NB1	174 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	ETNK1	Q9HBU6	452 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	TREX1	Q9NSU2	369 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	ANKRD10	Q9NXR5	420 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	TAC3	Q9UHF0	121 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	NPIPA1	Q9UND3	350 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	NEU2	Q9Y3R4	380 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	DUSP10	Q9Y6W6	482 aa		11.11	□□□□□ -0.63
CNOT4-208	ENST00000465721	GRID2IP	A4D2P6	1211 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721		E9PLN8	166 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	NIPSNAP2	O75323	286 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	NEURL1	O76050	574 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	HOXB1	P14653	301 aa	Predicted RBP	11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	CD1E	P15812	388 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	ABO	P16442	354 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	EEF1D	P29692	281 aa	Known RBP	11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	RPA3	P35244	121 aa	Predicted RBP	11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	FDFT1	P37268	417 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	EIF3B	P55884	814 aa	Known RBP	11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	RELA	Q04206	551 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	PRDX1	Q06830	199 aa	Known RBP	11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	SPA17	Q15506	151 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	MINDY4	Q4G0A6	757 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	RNFT1	Q5M7Z0	435 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	SPINK14	Q6IE38	97 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	C3P1	Q6ZMU1	363 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	ANKRD37	Q7Z713	158 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	DOLPP1	Q86YN1	238 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	PLD3	Q8IV08	490 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	CCDC170	Q8IYT3	715 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	GHDC	Q8N2G8	530 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	TMEM178A	Q8NBL3	297 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	PPHLN1	Q8NEY8	458 aa	Known RBP	11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	METTL21A	Q8WXB1	218 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	ATG4A	Q8WYN0	398 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	RERG	Q96A58	199 aa	Predicted RBP	11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	CALR3	Q96L12	384 aa	Known RBP	11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	BIRC8	Q96P09	236 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	CYTH2	Q99418	400 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	VKORC1	Q9BQB6	163 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	UTP23	Q9BRU9	249 aa	Known RBP	11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	KCNK13	Q9HB14	408 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	CHRAC1	Q9NRG0	131 aa		11.1	□□□□□ -0.63
CNOT4-208	ENST00000465721	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms