RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TBC1D3EA0A087X179 549 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TBC1D3KA0A087X1G2 549 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TBC1D3FA6NER0 549 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 TRPC5OSA6NMA1 111 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 POM121CA8CG34 1229 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TBC1D3LB9A6J9 549 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 K7EPI3 171 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 PLRG1O43660 514 aaKnown RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 NUAK1O60285 661 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 SERPINA6P08185 405 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TBC1D3HP0C7X1 549 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 EPHA3P29320 983 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 ARL1P40616 181 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 AP2S1P53680 142 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 ADPRHP54922 357 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 RPS21P63220 83 aaKnown RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 SH3BP2P78314 561 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 CDC16Q13042 620 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 SGCGQ13326 291 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 GBX1Q14549 363 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TBRG1Q3YBR2 411 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TBC1D3GQ6DHY5 549 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 CLEC6AQ6EIG7 209 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TBC1D3CQ6IPX1 549 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 KIAA1324Q6UXG2 1013 aaKnown RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 ACAD11Q709F0 780 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 UBE2R2Q712K3 238 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 ERI1Q8IV48 349 aaKnown RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 TBC1D3Q8IZP1 549 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 PDPRQ8NCN5 879 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 DLG3Q92796 817 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 KLK6Q92876 244 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 BORCS5Q969J3 196 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 PRR11Q96HE9 360 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 MRGPRX1Q96LB2 322 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 EPHX3Q9H6B9 360 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 ARL15Q9NXU5 204 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 ADGRE2Q9UHX3 823 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 EIF2B4Q9UI10 523 aaKnown RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 PCTPQ9UKL6 214 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 CDYLQ9Y232 598 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 NCKAP1Q9Y2A7 1128 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TRAF6Q9Y4K3 522 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TNPO3Q9Y5L0 923 aaKnown RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 A8MVJ9 347 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 PPP6CO00743 305 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 GRID2O43424 1007 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 CRCPO75575 148 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 OR6B1O95007 311 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 UNC5CO95185 931 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 CBX6O95503 412 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 IL33O95760 270 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 MLYCDO95822 493 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 JUNP05412 331 aaKnown RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 C8GP07360 202 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 HIST1H2AGP0C0S8 130 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 NCF2P19878 526 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 HIST1H2ADP20671 130 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 ACSL1P33121 698 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 RPL5P46777 297 aaKnown RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 RPIAP49247 311 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 CDK3Q00526 305 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 FOXK2Q01167 660 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 RBBP7Q16576 425 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 C21orf62-AS1Q17RA5 79 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 PXDC1Q5TGL8 231 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 KIAA1161Q6NSJ0 714 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 DOK6Q6PKX4 331 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 ADGRG6Q86SQ4 1221 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 KBTBD6Q86V97 674 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 RMND5BQ96G75 393 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 ZNF514Q96K75 400 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 HIST1H2AHQ96KK5 128 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 HIST1H2AJQ99878 128 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 H2AFJQ9BTM1 129 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 C1QTNF3Q9BXJ4 246 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TRIM54Q9BYV2 358 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 WDR55Q9H6Y2 383 aaPredicted RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 RDH14Q9HBH5 336 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TNFRSF12AQ9NP84 129 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 SLC2A4RGQ9NR83 387 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TXLNGQ9NUQ3 528 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 WWOXQ9NZC7 414 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 POU2F3Q9UKI9 436 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 BAG5Q9UL15 447 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 ZFR2Q9UPR6 939 aaKnown RBP10.06□□□□□ -0.8
HERC4-207ENST00000460168 NUMA1Q14980 2115 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 A0A1W2PQU0 124 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 TCRBV21S2A2A0A5A6 115 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 PRSS44E7EML9 344 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 GATCO43716 136 aaKnown RBP10.05□□□□□ -0.8
HERC4-207ENST00000460168 VEGFDO43915 354 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 ATP5HO75947 161 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 SLCO2B1O94956 709 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 BMP10O95393 424 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 ANXA5P08758 320 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 MPC1LP0DKB6 136 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 IL9P15248 144 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 ALOX12P18054 663 aa10.05□□□□□ -0.8
HERC4-207ENST00000460168 CYP2A7P20853 494 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms