RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 THAP11Q96EK4 314 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 C11orf24Q96F05 449 aaPredicted RBP8.39□□□□□ -1.07
RIF1-208ENST00000457745 NSL1Q96IY1 281 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 CLPTM1LQ96KA5 538 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 EGLN2Q96KS0 407 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 FCRL1Q96LA6 429 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 FRG2BQ96QU4 278 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 NPAS2Q99743 824 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 MRPL1Q9BYD6 325 aaKnown RBP8.39□□□□□ -1.07
RIF1-208ENST00000457745 TRIM8Q9BZR9 551 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 OR51B5Q9H339 312 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 LHX9Q9NQ69 397 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 DMRT3Q9NQL9 472 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 GPRC5BQ9NZH0 403 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 EXO1Q9UQ84 846 aaKnown RBP8.39□□□□□ -1.07
RIF1-208ENST00000457745 DYRK1BQ9Y463 629 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 CAPN7Q9Y6W3 813 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 CABIN1Q9Y6J0 2220 aa8.39□□□□□ -1.07
RIF1-208ENST00000457745 A0A0G2JN53 185 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 KLHL33A6NCF5 533 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 OR6C74A6NCV1 312 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 RNF223E7ERA6 249 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 RTCAO00442 366 aaKnown RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 TRIM38O00635 465 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 LCE2BO14633 110 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 P2RX6O15547 441 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 AQP9O43315 295 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 CCDC22O60826 627 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 CTSVO60911 334 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 DNAJB6O75190 326 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 SNUPNO95149 360 aaKnown RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 GBAP04062 536 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 CTSEP14091 401 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 SLC2A4P14672 509 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 AMD1P17707 334 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 SDC1P18827 310 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 GNAZP19086 355 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 ITGAXP20702 1163 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 HNRNPH1P31943 449 aaKnown RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 GRIA3P42263 894 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 MAPK9P45984 424 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 NAA20P61599 178 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 SLC25A3Q00325 362 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 CFHR1Q03591 330 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 ACTN3Q08043 901 aaPredicted RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 SQLEQ14534 574 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 ANGPT1Q15389 498 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 AGKQ53H12 422 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 PEAR1Q5VY43 1037 aaPredicted RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 METTL21CQ5VZV1 264 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 LIPJQ5W064 366 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 OGFOD3Q6PK18 319 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 TMEM26Q6ZUK4 368 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 VN1R4Q7Z5H5 301 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 AMIGO1Q86WK6 493 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 PAQR7Q86WK9 346 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 C17orf64Q86WR6 236 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 SLC35F3Q8IY50 421 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 LIX1Q8N485 282 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 DTWD1Q8N5C7 304 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 ZBTB44Q8NCP5 570 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 RBM15BQ8NDT2 890 aaKnown RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 GPR156Q8NFN8 814 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 OR4K1Q8NGD4 311 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 APOLD1Q96LR9 279 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 PLCD4Q9BRC7 762 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 CADM1Q9BY67 442 aaKnown RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 LRMDAQ9H2I8 198 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 KLHL31Q9H511 634 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 PELI2Q9HAT8 420 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 LRTM1Q9HBL6 345 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 SDR39U1Q9NRG7 319 aaPredicted RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 TAS2R1Q9NYW7 299 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 ACTR10Q9NZ32 417 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 TAGLN3Q9UI15 199 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 ERVK-11Q9UQG0 969 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 BTBD3Q9Y2F9 522 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 MRPS2Q9Y399 296 aaKnown RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 RRP15Q9Y3B9 282 aaKnown RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 KCNE2Q9Y6J6 123 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 RNF215Q9Y6U7 377 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 R4GN57 208 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 COL27A1Q8IZC6 1860 aaPredicted RBP8.38□□□□□ -1.07
RIF1-208ENST00000457745 RP1P56715 2156 aa8.38□□□□□ -1.07
RIF1-208ENST00000457745 A0A1B0GTW7 788 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 SERTM1A2A2V5 107 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 PABPN1LA6NDY0 278 aaKnown RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 ISM1B1AKI9 464 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 NPIPB8E9PQR5 432 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 FXYD1O00168 92 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 PSMD12O00232 456 aaPredicted RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 NR5A2O00482 541 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 KIF1CO43896 1103 aaKnown RBP8.37□□□□□ -1.07
RIF1-208ENST00000457745 UGDHO60701 494 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 ULK1O75385 1050 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 MED26O95402 600 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 TGFB1P01137 390 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 KRT6AP02538 564 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 KRT6BP04259 564 aa8.37□□□□□ -1.07
RIF1-208ENST00000457745 KRT16P08779 473 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms