RNA–Protein interactions for RNA: ENST00000456975.1

CCDC88A-209, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 2

Gene CCDC88A, Length 2,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-209ENST00000456975 TAB2Q9NYJ8 693 aa4.66□□□□□ -1.66
CCDC88A-209ENST00000456975 RBAKQ9NYW8 714 aaPredicted RBP4.66□□□□□ -1.66
CCDC88A-209ENST00000456975 TRPC4Q9UBN4 977 aa4.66□□□□□ -1.66
CCDC88A-209ENST00000456975 HCFC2Q9Y5Z7 792 aa4.66□□□□□ -1.66
CCDC88A-209ENST00000456975 TEX13CA0A0J9YWL9 993 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 A0A1W2PQ72 361 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 A0A1W2PQJ5 194 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 PQLC2LA1A4F0 135 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 MANSC4A6NHS7 340 aaPredicted RBP4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 WASHC1A8K0Z3 465 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 WASH3PC4AMC7 463 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 FAM86B1E9PN63 330 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 H3BNC9 293 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 TLX3O43711 291 aaPredicted RBP4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CST8O60676 142 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 PRAMEF4O60810 478 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 NDUFS3O75489 264 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 DCTN3O75935 186 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 NXPH2O95156 264 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 VAMP5O95183 116 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 SCGB1D1O95968 90 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 TGFAP01135 160 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CLEC3BP05452 202 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CEACAM5P06731 702 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 LYNP07948 512 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 FAM86B2P0C5J1 330 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 MCF2P10911 925 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 FPR1P21462 350 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 PTAFRP25105 342 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 PRDX5P30044 214 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CYP2C18P33260 490 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 MPIP34949 423 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 FEN1P39748 380 aaKnown RBP4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CD96P40200 585 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CASP3P42574 277 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 SYKP43405 635 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ENTPD1P49961 510 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 NUP107P57740 925 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CDK16Q00536 496 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 REEP5Q00765 189 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 SP3Q02447 781 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CD300CQ08708 224 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 KCNMA1Q12791 1236 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CRHR2Q13324 411 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 IRF4Q15306 451 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CEBPEQ15744 281 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 LRRC36Q1X8D7 754 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 BTBD16Q32M84 506 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 DUSP28Q4G0W2 176 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 TCP11X2Q5H9J9 407 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ZMAT1Q5H9K5 638 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 MFSD14BQ5SR56 506 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ETFRF1Q6IPR1 90 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CCDC137Q6PK04 289 aaKnown RBP4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 DHRS4L2Q6PKH6 230 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CES3Q6UWW8 571 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 WASH2PQ6VEQ5 465 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 GADL1Q6ZQY3 521 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 COLCA1Q6ZS62 124 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 TRIM69Q86WT6 500 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 RASGRP3Q8IV61 690 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 KIAA2013Q8IYS2 634 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ENTHD1Q8IYW4 607 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ADSSL1Q8N142 457 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 FAM86B1Q8N7N1 296 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 DCBLD1Q8N8Z6 715 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 OR6Q1Q8NGQ2 317 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 GRPEL2Q8TAA5 225 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 SCAMP5Q8TAC9 235 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 GLMPQ8WWB7 406 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 KCNE4Q8WWG9 221 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ST8SIA2Q92186 375 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 MTBPQ96DY7 904 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 KTI12Q96EK9 354 aaPredicted RBP4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CCDC51Q96ER9 411 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 KLHL5Q96PQ7 755 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 TAAR1Q96RJ0 339 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CCT8L2Q96SF2 557 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 KCNK16Q96T55 309 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 SSX3Q99909 188 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 HTATIP2Q9BUP3 242 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CACNG6Q9BXT2 260 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 GSDMCQ9BYG8 508 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 GPR63Q9BZJ6 419 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ADAMTS10Q9H324 1103 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 C12orf65Q9H3J6 166 aaKnown RBP4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ERVK-5Q9HDB9 667 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 MYOZ2Q9NPC6 264 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 KLHL1Q9NR64 748 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 SPATA6Q9NWH7 488 aaPredicted RBP4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 SMARCAL1Q9NZC9 954 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ANKMY1Q9P2S6 941 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 AJAP1Q9UKB5 411 aaPredicted RBP4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 MAN1B1Q9UKM7 699 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ANGEL1Q9UNK9 670 aaKnown RBP4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 LIPT1Q9Y234 373 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 CCL27Q9Y4X3 112 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 ASB4Q9Y574 426 aa4.65□□□□□ -1.66
CCDC88A-209ENST00000456975 PCDHAC2Q9Y5I4 1007 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms