RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 SERPINA12Q8IW75 414 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 AQP12AQ8IXF9 295 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 KLHDC8AQ8IYD2 350 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 C1orf87Q8N0U7 546 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 TMEM199Q8N511 208 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 GBGT1Q8N5D6 347 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 CPSF7Q8N684 471 aaKnown RBP4.68□□□□□ -1.66
CUL3-208ENST00000454323 THAP8Q8NA92 274 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 ZBTB44Q8NCP5 570 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 SPATA22Q8NHS9 363 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 RNF128Q8TEB7 428 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 FIG4Q92562 907 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 PRCCQ92733 491 aaPredicted RBP4.68□□□□□ -1.66
CUL3-208ENST00000454323 PROX1Q92786 737 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 P2RX5Q93086 422 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 ABTB1Q969K4 478 aaPredicted RBP4.68□□□□□ -1.66
CUL3-208ENST00000454323 EPSTI1Q96J88 318 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 C16orf45Q96MC5 204 aaPredicted RBP4.68□□□□□ -1.66
CUL3-208ENST00000454323 NAP1L5Q96NT1 182 aaPredicted RBP4.68□□□□□ -1.66
CUL3-208ENST00000454323 FAM111AQ96PZ2 611 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 TM6SF1Q9BZW5 370 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 VN1R1Q9GZP7 353 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 LRMDAQ9H2I8 198 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 Q9H8V8 135 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 TCP11L1Q9NUJ3 509 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 TRMT6Q9UJA5 497 aaKnown RBP4.68□□□□□ -1.66
CUL3-208ENST00000454323 SH3BGRL2Q9UJC5 107 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 HBS1LQ9Y450 684 aaKnown RBP4.68□□□□□ -1.66
CUL3-208ENST00000454323 SNX9Q9Y5X1 595 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 CCDC144AA2RUR9 1427 aa4.68□□□□□ -1.66
CUL3-208ENST00000454323 TNS1Q9HBL0 1735 aaKnown RBP4.68□□□□□ -1.66
CUL3-208ENST00000454323 CFAP65Q6ZU64 1925 aaKnown RBP4.68□□□□□ -1.66
CUL3-208ENST00000454323 TEX13DA0A0J9YY54 714 aaPredicted RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 A0A1B0GVT2 93 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 MED19A0JLT2 244 aaPredicted RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 C5orf60A6NFR6 353 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 INAFM1C9JVW0 142 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 K7EPI3 171 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 CACNB4O00305 520 aaPredicted RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 NDC80O14777 642 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 MID1O15344 667 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 RAD51DO75771 328 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 MYL6BP14649 208 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 GM2AP17900 193 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 C21orf33P30042 268 aaPredicted RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 MAGEB1P43366 347 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 GFPT1Q06210 699 aaPredicted RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 DHX34Q14147 1143 aaKnown RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 SLC15A2Q16348 729 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 CA9Q16790 459 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 KCTD11Q693B1 232 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 ZNF324BQ6AW86 544 aaPredicted RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 C11orf63Q6NUN7 778 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 NEK5Q6P3R8 708 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 ZCCHC12Q6PEW1 402 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 MFSD7Q6UXD7 560 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 UNC5DQ6UXZ4 953 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 ZNF704Q6ZNC4 412 aaPredicted RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 ANKRD33Q7Z3H0 272 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 CUZD1Q86UP6 607 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 ANKRD46Q86W74 232 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 TMPRSS12Q86WS5 348 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 ELMOD2Q8IZ81 293 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 CLEC1AQ8NC01 280 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 PPFIBP2Q8ND30 876 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 FGFBP3Q8TAT2 258 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 CKAP2Q8WWK9 683 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 TMEM186Q96B77 213 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 PHF21AQ96BD5 680 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 AP2M1Q96CW1 435 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 MRPL38Q96DV4 380 aaKnown RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 SPATA13Q96N96 652 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 PKP2Q99959 881 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 NTPCRQ9BSD7 190 aaKnown RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 ARRDC1-AS1Q9H2J1 176 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 SNX25Q9H3E2 840 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 SYTL2Q9HCH5 934 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 ZNF701Q9NV72 531 aaPredicted RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 TRIM10Q9UDY6 481 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 WDR83OSQ9Y284 106 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 AMDHD2Q9Y303 409 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 STRAPQ9Y3F4 350 aaKnown RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 PTPN23Q9H3S7 1636 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 UTRNP46939 3433 aa4.67□□□□□ -1.66
CUL3-208ENST00000454323 PDS5AQ29RF7 1337 aaKnown RBP4.67□□□□□ -1.66
CUL3-208ENST00000454323 ARHGEF10O15013 1369 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 NALCNQ8IZF0 1738 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 TECPR2O15040 1411 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 MYOM3Q5VTT5 1437 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 RRBP1Q9P2E9 1410 aaKnown RBP4.66□□□□□ -1.66
CUL3-208ENST00000454323 TRBV2A0A0J9YWF9 115 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 ZCWPW2A0A1B0GU75 182 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 H0YIG0 161 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 ATP9AO75110 1047 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 TRIM16O95361 564 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 HOXB2P14652 356 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 MYOD1P15172 320 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 CSF2RAP15509 400 aa4.66□□□□□ -1.66
CUL3-208ENST00000454323 HOXD3P31249 432 aaPredicted RBP4.66□□□□□ -1.66
CUL3-208ENST00000454323 CDKN1AP38936 164 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms