RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 EFCAB11Q9BUY7 163 aa11.12□□□□□ -0.63
LINC00408-201ENST00000447784 DPH1Q9BZG8 443 aa11.12□□□□□ -0.63
LINC00408-201ENST00000447784 DRC3Q9H069 523 aa11.12□□□□□ -0.63
LINC00408-201ENST00000447784 NOL11Q9H8H0 719 aaKnown RBP11.12□□□□□ -0.63
LINC00408-201ENST00000447784 PELI2Q9HAT8 420 aa11.12□□□□□ -0.63
LINC00408-201ENST00000447784 SLC6A20Q9NP91 592 aa11.12□□□□□ -0.63
LINC00408-201ENST00000447784 SEMA4BQ9NPR2 832 aaPredicted RBP11.12□□□□□ -0.63
LINC00408-201ENST00000447784 CUEDC1Q9NWM3 386 aaPredicted RBP11.12□□□□□ -0.63
LINC00408-201ENST00000447784 SEMA5BQ9P283 1151 aa11.12□□□□□ -0.63
LINC00408-201ENST00000447784 SERTAD3Q9UJW9 196 aa11.12□□□□□ -0.63
LINC00408-201ENST00000447784 PCTPQ9UKL6 214 aa11.12□□□□□ -0.63
LINC00408-201ENST00000447784 PLCL2Q9UPR0 1127 aa11.12□□□□□ -0.63
LINC00408-201ENST00000447784 ASB1Q9Y576 335 aa11.12□□□□□ -0.63
LINC00408-201ENST00000447784 COL27A1Q8IZC6 1860 aaPredicted RBP11.11□□□□□ -0.63
LINC00408-201ENST00000447784 KNTC1P50748 2209 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 PMS2P1A4D2B8 440 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 LRRC14BA6NHZ5 514 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 E7EQ34 232 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 E2F3O00716 465 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 CRCPO75575 148 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 BPGMP07738 259 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 RPS17P08708 135 aaKnown RBP11.11□□□□□ -0.63
LINC00408-201ENST00000447784 ITPKBP27987 946 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 CCNG1P51959 295 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 RPS15AP62244 130 aaKnown RBP11.11□□□□□ -0.63
LINC00408-201ENST00000447784 CLCQ05315 142 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 CHIT1Q13231 466 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 TUBB3Q13509 450 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 MPP2Q14168 576 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 KCNAB1Q14722 419 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 C16orf72Q14CZ0 275 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 PCLAFQ15004 111 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 RBBP5Q15291 538 aaKnown RBP11.11□□□□□ -0.63
LINC00408-201ENST00000447784 UNC50Q53HI1 259 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 CATSPEREQ5SY80 951 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 TMEM164Q5U3C3 297 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 ATG9BQ674R7 924 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 SLCO4C1Q6ZQN7 724 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 MILR1Q7Z6M3 343 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 BPHLQ86WA6 291 aaPredicted RBP11.11□□□□□ -0.63
LINC00408-201ENST00000447784 MCATQ8IVS2 390 aaKnown RBP11.11□□□□□ -0.63
LINC00408-201ENST00000447784 TRIM42Q8IWZ5 723 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 SPACA3Q8IXA5 215 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 D2HGDHQ8N465 521 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 ARFGAP2Q8N6H7 521 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 TRPC4APQ8TEL6 797 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 ZNF483Q8TF39 744 aaPredicted RBP11.11□□□□□ -0.63
LINC00408-201ENST00000447784 PTCD3Q96EY7 689 aaKnown RBP11.11□□□□□ -0.63
LINC00408-201ENST00000447784 TMEM237Q96Q45 408 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 ZFYVE21Q9BQ24 234 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 C1QTNF3Q9BXJ4 246 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 NLNQ9BYT8 704 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 CHRNA10Q9GZZ6 450 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 EHD1Q9H4M9 534 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 EML4Q9HC35 981 aaKnown RBP11.11□□□□□ -0.63
LINC00408-201ENST00000447784 MLXIPLQ9NP71 852 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 FGF21Q9NSA1 209 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 SLC39A1Q9NY26 324 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 RARRES3Q9UL19 164 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 BTRCQ9Y297 605 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 KLK4Q9Y5K2 254 aa11.11□□□□□ -0.63
LINC00408-201ENST00000447784 A0A0J9YVX5 310 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 OR2A25A4D2G3 310 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 B4E171 279 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 H3BQF6 201 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 POLR1CO15160 346 aaPredicted RBP11.1□□□□□ -0.63
LINC00408-201ENST00000447784 OR1F1O43749 312 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 SRPX2O60687 465 aaPredicted RBP11.1□□□□□ -0.63
LINC00408-201ENST00000447784 UGDHO60701 494 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 PRAMEF10O60809 474 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 CLDN9O95484 217 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 EIF2S1P05198 315 aaKnown RBP11.1□□□□□ -0.63
LINC00408-201ENST00000447784 EBLN1P0CF75 366 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 FOLR1P15328 257 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 VARSP26640 1264 aaKnown RBP11.1□□□□□ -0.63
LINC00408-201ENST00000447784 HNF4AP41235 474 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 TSPAN7P41732 249 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 ETV4P43268 484 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 UCNP55089 124 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 CDH13P55290 713 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 PPP2R2AP63151 447 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 YBX1P67809 324 aaKnown RBP11.1□□□□□ -0.63
LINC00408-201ENST00000447784 CSNK1G2P78368 415 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 RELAQ04206 551 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 TLE3Q04726 772 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 LCP2Q13094 533 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 DOC2AQ14183 400 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 SLBPQ14493 270 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00408-201ENST00000447784 IL11RAQ14626 422 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 TBCCQ15814 346 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 ZIC1Q15915 447 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 TTC19Q6DKK2 380 aaPredicted RBP11.1□□□□□ -0.63
LINC00408-201ENST00000447784 FCRL6Q6DN72 434 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 ZNF425Q6IV72 752 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 PAQR7Q86WK9 346 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 GPR135Q8IZ08 494 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 DNAJC22Q8N4W6 341 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 OR4K1Q8NGD4 311 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 OR8K5Q8NH50 307 aa11.1□□□□□ -0.63
LINC00408-201ENST00000447784 DYDC1Q8WWB3 177 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms