RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TRMT61AQ96FX7 289 aaKnown RBP13.52□□□□□ -0.24
VPS52-212ENST00000445902 UBA2Q9UBT2 640 aaPredicted RBP13.52□□□□□ -0.24
VPS52-212ENST00000445902 DUSP12Q9UNI6 340 aa13.52□□□□□ -0.24
VPS52-212ENST00000445902 WWP2O00308 870 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 CDK2AP1O14519 115 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 TAPBPO15533 448 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 RAMP2O60895 175 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 TMCC2O75069 709 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 WDR47O94967 919 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 NUDT7P0C024 238 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 OR4Q2P0C623 313 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 IL1RNP18510 177 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 RGRP47804 291 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 LIMK1P53667 647 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 FAPQ12884 760 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 CYP27C1Q4G0S4 372 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 LRRC66Q68CR7 880 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 ZNF621Q6ZSS3 439 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 MAL2Q969L2 176 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 MYEOVQ96EZ4 313 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 OLA1Q9NTK5 396 aaKnown RBP13.52□□□□□ -0.25
VPS52-212ENST00000445902 IMPAD1Q9NX62 359 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 SNX7Q9UNH6 387 aa13.52□□□□□ -0.25
VPS52-212ENST00000445902 B4DXG7 233 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 CPSF4O95639 269 aaKnown RBP13.51□□□□□ -0.25
VPS52-212ENST00000445902 OPN1SWP03999 348 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 CKMT1AP12532 417 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 OR1E1P30953 314 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 MAD2L1Q13257 205 aaPredicted RBP13.51□□□□□ -0.25
VPS52-212ENST00000445902 PCBP2Q15366 365 aaKnown RBP eCLIP13.51□□□□□ -0.252e-10■■■□□ 19
VPS52-212ENST00000445902 VMACQ2NL98 169 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 FBXO43Q4G163 708 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 CDONQ4KMG0 1287 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 ABI3BPQ7Z7G0 1075 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 ATCAYQ86WG3 371 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 TEX26Q8N6G2 289 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 LPCAT1Q8NF37 534 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 OR10T2Q8NGX3 314 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 SETD6Q8TBK2 473 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 TADA1Q96BN2 335 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 RPRD1AQ96P16 312 aaPredicted RBP13.51□□□□□ -0.25
VPS52-212ENST00000445902 NIPSNAP1Q9BPW8 284 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 SRRQ9GZT4 340 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 WWOXQ9NZC7 414 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 ITM2BQ9Y287 266 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 PTPRDP23468 1912 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 CLIC1O00299 241 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 KCNK5O95279 499 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 MMP3P08254 477 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 RHOQP17081 205 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 CD72P21854 359 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 PCSK1P29120 753 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 ITGA1P56199 1179 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 EFEMP1Q12805 493 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 LRIF1Q5T3J3 769 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 FBXL22Q6P050 247 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 GLRX5Q86SX6 157 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 FAM124AQ86V42 546 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 AMIGO1Q86WK6 493 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 ZZZ3Q8IYH5 903 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 CFAP52Q8N1V2 620 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 TMEM86AQ8N2M4 240 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 EBPLQ9BY08 206 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 SLC22A4Q9H015 551 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 ATP13A2Q9NQ11 1180 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 TMPRSS11EQ9UL52 423 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 TRAPPC4Q9Y296 219 aa13.51□□□□□ -0.25
VPS52-212ENST00000445902 CFAP20Q9Y6A4 193 aaKnown RBP13.51□□□□□ -0.25
VPS52-212ENST00000445902 TRAV19A0A0A6YYK7 116 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 SCAMP3O14828 347 aaKnown RBP13.5□□□□□ -0.25
VPS52-212ENST00000445902 NOS1APO75052 506 aaPredicted RBP13.5□□□□□ -0.25
VPS52-212ENST00000445902 SMIM10L2AP0DMW4 78 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 SMIM10L2BP0DMW5 78 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 CYP2A6P11509 494 aaPredicted RBP13.5□□□□□ -0.25
VPS52-212ENST00000445902 CSNK2BP67870 215 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 NKX3-2P78367 333 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 SCN1BQ07699 218 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 RNF175Q8N4F7 328 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 SPPL2AQ8TCT8 520 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 FRMD6Q96NE9 622 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 PANX1Q96RD7 426 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 ACPTQ9BZG2 426 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 ABHD16BQ9H3Z7 469 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 PRDM5Q9NQX1 630 aaPredicted RBP13.5□□□□□ -0.25
VPS52-212ENST00000445902 ASAH2Q9NR71 780 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 RPS6KA6Q9UK32 745 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 HSPB11Q9Y547 144 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 KLK4Q9Y5K2 254 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 A0A0D9SEW6 157 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 NT5C1B-RDH14C9J2C7 533 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 SLC28A1O00337 649 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 MANBAO00462 879 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 ARHGEF9O43307 516 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 OR1E2P47887 323 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 VEPH1Q14D04 833 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 FAAH2Q6GMR7 532 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 ZFAND1Q8TCF1 268 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 GPR152Q8TDT2 470 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 GON7Q9BXV9 100 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 HDHD5Q9BXW7 423 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms