RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 C8orf4Q9NR00 106 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 TMEM184CQ9NVA4 438 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 SIRT5Q9NXA8 310 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 MCM8Q9UJA3 840 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 ANAPC2Q9UJX6 822 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 CYP8B1Q9UNU6 501 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 MAN2B2Q9Y2E5 1009 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 DTNAQ9Y4J8 743 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 MAGEB17A8MXT2 336 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 NME4O00746 187 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 RFXANKO14593 260 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ANKRD28O15084 1053 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 HNRNPRO43390 633 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 AKAP10O43572 662 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PEX1O43933 1283 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ANXA6P08133 673 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 CTSEP14091 401 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 IL12AP29459 219 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 DGKQP52824 942 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 SRP54P61011 504 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 CYP4F3Q08477 520 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PTGR1Q14914 329 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 DUOXA1Q1HG43 343 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 TMEM35AQ53FP2 167 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 WLSQ5T9L3 541 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ICE2Q659A1 982 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 SUSD1Q6UWL2 747 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ABRAXAS1Q6UWZ7 409 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 TMEM92Q6UXU6 159 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 GJD3Q8N144 294 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 SPDYE1Q8NFV5 336 aaPredicted RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 CLHC1Q8NHS4 586 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 CHTF18Q8WVB6 975 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 OR1E3Q8WZA6 343 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PPWD1Q96BP3 646 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 FGF22Q9HCT0 170 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 MRPS30Q9NP92 439 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 CMTM6Q9NX76 183 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 SPASTQ9UBP0 616 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 GULP1Q9UBP9 304 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PACSIN3Q9UKS6 424 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 CA14Q9ULX7 337 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PLAGL1Q9UM63 463 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PCDHB3Q9Y5E6 796 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PCDHGA2Q9Y5H1 932 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PCDHA9Q9Y5H5 950 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 TRPM6Q9BX84 2022 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 TRBC2A0A5B9 178 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PRORSD1PA6NEY8 169 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ANTXRLA6NF34 631 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ISM1B1AKI9 464 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 FXYD1O00168 92 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ACOT8O14734 319 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 NARSO43776 548 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 VIPP01282 170 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 RPL10P27635 214 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 ACSL1P33121 698 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 BIRC2Q13490 618 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 KIAA0040Q15053 153 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PLCL1Q15111 1095 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PAGE3Q5JUK9 113 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 CATSPEREQ5SY80 951 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ANO7Q6IWH7 933 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 NANOGP8Q6NSW7 305 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ARMC6Q6NXE6 501 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 RBM12BQ8IXT5 1001 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 METTL4Q8N3J2 472 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ICA1LQ8NDH6 482 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 GPR156Q8NFN8 814 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ABHD11Q8NFV4 315 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 RGMAQ96B86 450 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PPCDCQ96CD2 204 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 KLHDC7BQ96G42 594 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 DUS3LQ96G46 650 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 SPACA7Q96KW9 195 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 PPM1MQ96MI6 270 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 DUSP26Q9BV47 211 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ACAT2Q9BWD1 397 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 FAIM2Q9BWQ8 316 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 SPATA9Q9BWV2 254 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 UGT2B28Q9BY64 529 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 NANOGQ9H9S0 305 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 MYNNQ9NPC7 610 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 AASDHPPTQ9NRN7 309 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 OR6C2Q9NZP2 312 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 WNT16Q9UBV4 365 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 VPS4AQ9UN37 437 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 INVSQ9Y283 1065 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 DLGAP4Q9Y2H0 992 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 DHRS12A0PJE2 317 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 FAM221BA6H8Z2 402 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 STK25O00506 426 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 SCAMP2O15127 329 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 LATO43561 262 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 CLEC3AO75596 197 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 CLDN2P57739 230 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ABHD18Q0P651 414 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 TBCELQ5QJ74 424 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 SWT1Q5T5J6 900 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 GALNT18Q6P9A2 607 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms