RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HNRNPKP61978 463 aaKnown RBP eCLIP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SH3BP2P78314 561 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF460Q14592 562 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 MYBPC3Q14896 1274 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 OR4D1Q15615 310 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 GGTA1PQ4G0N0 100 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 ZRANB3Q5FWF4 1079 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 HES3Q5TGS1 186 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 FOXB2Q5VYV0 432 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PNCKQ6P2M8 343 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 GPRIN3Q6ZVF9 776 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TRIM69Q86WT6 500 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PLPP6Q8IY26 295 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CLDN19Q8N6F1 224 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 LMNTD1Q8N9Z9 388 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TP53I13Q8NBR0 393 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TRPV3Q8NET8 790 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SPDYE1Q8NFV5 336 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 OR4K2Q8NGD2 314 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF420Q8TAQ5 688 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 EME1Q96AY2 570 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 LRRC58Q96CX6 371 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SCRN2Q96FV2 425 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CRELD1Q96HD1 420 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 NDNQ99608 321 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 NPAS2Q99743 824 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 C1QTNF7Q9BXJ2 289 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CPEB1Q9BZB8 566 aaKnown RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 RBM38Q9H0Z9 239 aaKnown RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 MID1IP1Q9NPA3 183 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 AGPAT4Q9NRZ5 378 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 RAD18Q9NS91 495 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TRPS1Q9UHF7 1281 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 GNPTGQ9UJJ9 305 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 GPR34Q9UPC5 381 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 MYRFQ9Y2G1 1151 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PPIL1Q9Y3C6 166 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 OARD1Q9Y530 152 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PCDHB3Q9Y5E6 796 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 LRRK1Q38SD2 2015 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PCDH15Q96QU1 1955 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PRORSD1PA6NEY8 169 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 CAPN8A6NHC0 703 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 AGAP14A8MT82 685 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 FADS2P1A8MWK0 482 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 H3BNH8 94 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TM4SF5O14894 197 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SLC16A5O15375 505 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SKAP2O75563 359 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PRSS23O95084 383 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 RASAL1O95294 804 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 EML2O95834 649 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TSPAN12O95859 305 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 ALDOCP09972 364 aaKnown RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 CYP2A6P11509 494 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF7P17097 686 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 ABCG1P45844 678 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 RABIFP47224 123 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 CDK3Q00526 305 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 CTBSQ01459 385 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 ATP6AP1Q15904 470 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 ST3GAL2Q16842 350 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 ATP13A5Q4VNC0 1218 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF789Q5FWF6 425 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PERM1Q5SV97 790 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PHF19Q5T6S3 580 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 RNF220Q5VTB9 566 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TMEM198Q66K66 360 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SULT1C3Q6IMI6 304 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 DHRS4L2Q6PKH6 230 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PAOXQ6QHF9 649 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 IL27RAQ6UWB1 636 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 MACC1Q6ZN28 852 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 NEK10Q6ZWH5 1172 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 ZFAND4Q86XD8 727 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 GPSM1Q86YR5 675 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SLC35F3Q8IY50 421 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 KLHDC8AQ8IYD2 350 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 LILRA2Q8N149 483 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 C2orf73Q8N5S3 287 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 LILRA3Q8N6C8 439 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SKA2Q8WVK7 121 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 ULK4Q96C45 1275 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 MARK4Q96L34 752 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 KLHL25Q9H0H3 589 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 FAM83DQ9H4H8 585 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 MAGIXQ9H6Y5 334 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 COPS7BQ9H9Q2 264 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PRDM8Q9NQV8 689 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TMEM9Q9P0T7 183 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 NFKBIL1Q9UBC1 381 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 FKBPLQ9UIM3 349 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 CNOT6Q9ULM6 557 aaKnown RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 MED16Q9Y2X0 877 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PKP3Q9Y446 797 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 GMEB1Q9Y692 573 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 MUC22E2RYF6 1773 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 A0A087WXM4 84 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 DHRS12A0PJE2 317 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PRSS38A1L453 326 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms