RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ARID3BQ8IVW6 561 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 CCDC60Q8IWA6 550 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 KLHDC8AQ8IYD2 350 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 LRRC34Q8IZ02 419 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 FBXO39Q8N4B4 442 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 CERS5Q8N5B7 392 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 CCDC63Q8NA47 563 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 PDPRQ8NCN5 879 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 NLGN4YQ8NFZ3 816 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 PHOSPHO2Q8TCD6 241 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 TAS1R2Q8TE23 839 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 C2CD4CQ8TF44 421 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 TMEM171Q8WVE6 324 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 LPIN2Q92539 896 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 OSTF1Q92882 214 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 TOP1MTQ969P6 601 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 ULK4Q96C45 1275 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 LINGO1Q96FE5 620 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 SENP8Q96LD8 212 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 CHP1Q99653 195 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 SEPT5Q99719 369 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 RBM4BQ9BQ04 359 aaKnown RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF559Q9BR84 538 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 MRI1Q9BV20 369 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 RBM4Q9BWF3 364 aaKnown RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 SPATA16Q9BXB7 569 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 C1QTNF5Q9BXJ0 243 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 MRPL13Q9BYD1 178 aaKnown RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 BLZF1Q9H2G9 400 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 KCNK15Q9H427 330 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 RAD21L1Q9H4I0 556 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 FBXO44Q9H4M3 255 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 RGCCQ9H4X1 137 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 TMEM231Q9H6L2 316 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZFP14Q9HCL3 533 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 KLHL1Q9NR64 748 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 YAE1D1Q9NRH1 226 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZCCHC3Q9NUD5 404 aaKnown RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 DDX28Q9NUL7 540 aaKnown RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 GTSE1Q9NYZ3 720 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 NDUFA13Q9P0J0 144 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 ARPP21Q9UBL0 812 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 DNAJB4Q9UDY4 337 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 AMFRQ9UKV5 643 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 RNF24Q9Y225 148 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 FOXA2Q9Y261 457 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 SRPRBQ9Y5M8 271 aaKnown RBP3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 CARMIL1Q5VZK9 1371 aa3.48□□□□□ -1.85
HMGB1P12-201ENST00000438594 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRAV25A0A0B4J276 109 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 A0A0J9YYE9 177 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM240BA0A1B0GVZ2 78 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 KANSL1LA0AUZ9 987 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 NPIPB11E5RHQ5 1161 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 H3BMM5 538 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 GOLGA8TH3BQL2 631 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 CES2O00748 559 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF213O14771 459 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PPM1DO15297 605 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 NDUFS4O43181 175 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ADAM12O43184 909 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PPIP5K2O43314 1243 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 RNF13O43567 381 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 STRNO43815 780 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 DFNA5O60443 496 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PROP1O75360 226 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ATP5HO75947 161 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 RSL1D1O76021 490 aaKnown RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 MYO1DO94832 1006 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRBC1P01850 177 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 KRT6AP02538 564 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ICAM1P05362 532 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ELANEP08246 267 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 HOXB5P09067 269 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 STAG3L1P0CL83 205 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 IRF1P10914 325 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 GJA1P17302 382 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PAICSP22234 425 aaKnown RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC6A2P23975 617 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 OR1D2P34982 312 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRIM23P36406 574 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PPP1R2P41236 205 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 GRIA1P42261 906 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC1A6P48664 564 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 CSNK1EP49674 416 aaKnown RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 RGS19P49795 217 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ANXA11P50995 505 aaKnown RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 VBP1P61758 197 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 YWHAEP62258 255 aaKnown RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 SIRPAP78324 504 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 BNC1Q01954 994 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 BFSP2Q13515 415 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 CCNIQ14094 377 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 MAPRE2Q15555 327 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 STXBP2Q15833 593 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 EZH2Q15910 746 aaKnown RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 SSX2Q16385 188 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PARP6Q2NL67 630 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 HKDC1Q2TB90 917 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ADPRMQ3LIE5 342 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms