RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 AKT2P31751 481 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CAPGP40121 348 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PTGER3P43115 390 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 XKP51811 444 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 MLLT10P55197 1068 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CDH11P55287 796 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF155Q12901 538 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 BAATQ14032 418 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 DUSP6Q16828 381 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 TMEM119Q4V9L6 283 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PRAMEF17Q5VTA0 474 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 BICRALQ6AI39 1079 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 DBX2Q6ZNG2 339 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CHMP1BQ7LBR1 199 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 STX19Q8N4C7 294 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PCDH19Q8TAB3 1148 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 UBASH3BQ8TF42 649 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 XAGE3Q8WTP9 111 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 TM9SF4Q92544 642 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 EDEM1Q92611 657 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ELMOD3Q96FG2 381 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 SLITRK1Q96PX8 696 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 OR14A2Q96R54 314 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ECSITQ9BQ95 431 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PRO1933Q9H354 126 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ANKRA2Q9H9E1 313 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 TMBIM4Q9HC24 238 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 KRCC1Q9NPI7 259 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 FBXO34Q9NWN3 711 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 GMPR2Q9P2T1 348 aaKnown RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ZNHIT2Q9UHR6 403 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PCDHA7Q9UN72 937 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ZFR2Q9UPR6 939 aaKnown RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PEX16Q9Y5Y5 336 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CACNA1GO43497 2377 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 UBA6A0AVT1 1052 aaPredicted RBP5.21□□□□□ -1.57
PTPN4-203ENST00000430976 H0Y8G0 127 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 ERVH48-1M5A8F1 160 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 SCDO00767 359 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 RGS13O14921 159 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 NME2P1O60361 137 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 PSMG1O95456 288 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 PF4P02776 101 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 SLC35G4P0C7Q5 338 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 SMIM6P0DI80 62 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 UROSP10746 265 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 HOXB3P14651 431 aaPredicted RBP5.21□□□□□ -1.57
PTPN4-203ENST00000430976 GLDCP23378 1020 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 HLA-DMAP28067 261 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 METAP2P50579 478 aaKnown RBP eCLIP5.21□□□□□ -1.57
PTPN4-203ENST00000430976 RAG2P55895 527 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 ILKQ13418 452 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 PRMT9Q6P2P2 845 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 HAGHLQ6PII5 290 aaPredicted RBP5.21□□□□□ -1.57
PTPN4-203ENST00000430976 BBS12Q6ZW61 710 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 SYT13Q7L8C5 426 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 SLC22A16Q86VW1 577 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 MREGQ8N565 214 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 CPT1CQ8TCG5 803 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 PAQR8Q8TEZ7 354 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 TMEM143Q96AN5 459 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 ZHX1-C8orf76Q96EF9 292 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 TMEM169Q96HH4 297 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 NSL1Q96IY1 281 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 AMDHD1Q96NU7 426 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 SPATA5L1Q9BVQ7 753 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 PITPNM3Q9BZ71 974 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 EPB41L4BQ9H329 900 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 ASB7Q9H672 318 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 GEMIN7Q9H840 131 aaKnown RBP5.21□□□□□ -1.57
PTPN4-203ENST00000430976 CTPS2Q9NRF8 586 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 MTMR10Q9NXD2 777 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 PPIL1Q9Y3C6 166 aa5.21□□□□□ -1.57
PTPN4-203ENST00000430976 ARHGAP31Q2M1Z3 1444 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 OR5K3A6NET4 321 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 C1orf196B1AJZ1 125 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 SOX1O00570 391 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-203ENST00000430976 ADAM10O14672 748 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 SIVA1O15304 175 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 PAPSS2O95340 614 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-203ENST00000430976 SMPD1P17405 629 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 MATN1P21941 496 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 HSD11B1P28845 292 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 LTBRP36941 435 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 RAD23AP54725 363 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 KCNQ4P56696 695 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 BNIP2Q12982 314 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 SEMA5AQ13591 1074 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 PTGR1Q14914 329 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 NR1I3Q14994 352 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 NRF1Q16656 503 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 FBXO47Q5MNV8 452 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 FAM69BQ5VUD6 431 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 IZUMO3Q5VZ72 239 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 RWDD4Q6NW29 188 aaKnown RBP5.21□□□□□ -1.58
PTPN4-203ENST00000430976 LIPIQ6XZB0 460 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 RBM43Q6ZSC3 357 aaKnown RBP5.21□□□□□ -1.58
PTPN4-203ENST00000430976 SAMD7Q7Z3H4 446 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 ARPINQ7Z6K5 226 aa5.21□□□□□ -1.58
PTPN4-203ENST00000430976 TCTEX1D2Q8WW35 142 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms