RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ST6GALNAC3Q8NDV1 305 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 CATSPER1Q8NEC5 780 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 BRIX1Q8TDN6 353 aaKnown RBP16.22■□□□□ 0.19
TRIM39-209ENST00000428728 SIGLEC10Q96LC7 697 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 NDNQ99608 321 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 MKKSQ9NPJ1 570 aaPredicted RBP16.22■□□□□ 0.19
TRIM39-209ENST00000428728 CCDC177Q9NQR7 707 aaPredicted RBP16.22■□□□□ 0.19
TRIM39-209ENST00000428728 PTGFRNQ9P2B2 879 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 TRMT6Q9UJA5 497 aaKnown RBP16.22■□□□□ 0.19
TRIM39-209ENST00000428728 MRPS2Q9Y399 296 aaKnown RBP16.22■□□□□ 0.19
TRIM39-209ENST00000428728 COMMD10Q9Y6G5 202 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 IGHV1-45A0A0A0MS14 117 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 H7BY64 318 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 TXNDC9O14530 226 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 BANF1O75531 89 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 CLDN1O95832 211 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 COL8A1P27658 744 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 SKIV2L2P42285 1042 aaKnown RBP16.21■□□□□ 0.19
TRIM39-209ENST00000428728 SNRPNP63162 240 aaKnown RBP16.21■□□□□ 0.19
TRIM39-209ENST00000428728 ARG2P78540 354 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 CRYMQ14894 314 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 FAM180AQ6UWF9 173 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 CYHR1Q6ZMK1 362 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 MBOAT1Q6ZNC8 495 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 ZC3H7AQ8IWR0 971 aaKnown RBP16.21■□□□□ 0.19
TRIM39-209ENST00000428728 LMNTD2Q8IXW0 634 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 PPIL6Q8IXY8 311 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 SLC35F6Q8N357 371 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 ARHGEF39Q8N4T4 335 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 GRK7Q8WTQ7 553 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 MAGEB10Q96LZ2 347 aaPredicted RBP16.21■□□□□ 0.19
TRIM39-209ENST00000428728 PRAP1Q96NZ9 151 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 OSBPL9Q96SU4 736 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 EBNA1BP2Q99848 306 aaKnown RBP16.21■□□□□ 0.19
TRIM39-209ENST00000428728 RIC8BQ9NVN3 520 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 ADAMTS6Q9UKP5 1117 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 SH2B3Q9UQQ2 575 aa16.21■□□□□ 0.19
TRIM39-209ENST00000428728 GOLGA6L10A0A0M3HER8 536 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 F10P00742 488 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 EFNA3P52797 238 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 PPP1R7Q15435 360 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 NDUFA9Q16795 377 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 RNASEH2BQ5TBB1 312 aaKnown RBP16.2■□□□□ 0.18
TRIM39-209ENST00000428728 MFSD4BQ5TF39 518 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 ZNF787Q6DD87 383 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 OR1N1Q8NGS0 311 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 OR9A4Q8NGU2 314 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 FAR1Q8WVX9 515 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 PSMF1Q92530 271 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 ALKBH8Q96BT7 664 aaKnown RBP16.2■□□□□ 0.18
TRIM39-209ENST00000428728 LMF1Q96S06 567 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 PLA2G3Q9NZ20 509 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 ASIC3Q9UHC3 531 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 MKL2Q9ULH7 1088 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 POLEQ07864 2286 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 DOPEY1Q5JWR5 2465 aa16.2■□□□□ 0.18
TRIM39-209ENST00000428728 DYTNA2CJ06 578 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 JRKO75564 520 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 SERPINA7P05543 415 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 IL1RNP18510 177 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 PGAM1P18669 254 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 FDXRP22570 491 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 SOX11P35716 441 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 AVPR1BP47901 424 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 FNTAP49354 379 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 RGS4P49798 205 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 RELAQ04206 551 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 PTK6Q13882 451 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 PCOLCEQ15113 449 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 RBM20Q5T481 1227 aaKnown RBP16.19■□□□□ 0.18
TRIM39-209ENST00000428728 PRSS41Q7RTY9 318 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 VN1R4Q7Z5H5 301 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 AMER2Q8N7J2 671 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 C2CD4AQ8NCU7 369 aaPredicted RBP16.19■□□□□ 0.18
TRIM39-209ENST00000428728 ZCCHC10Q8TBK6 192 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 EEF1AKMT1Q8WVE0 214 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 MACROD1Q9BQ69 325 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 TGIF2Q9GZN2 237 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 HCN3Q9P1Z3 774 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 SLC17A6Q9P2U8 582 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 PDE10AQ9Y233 779 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 OSGIN2Q9Y236 505 aa16.19■□□□□ 0.18
TRIM39-209ENST00000428728 A0A1W2PQ72 361 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 FEZF1A0PJY2 475 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 WIPF3A6NGB9 483 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 EIF3FO00303 357 aaPredicted RBP16.18■□□□□ 0.18
TRIM39-209ENST00000428728 WFS1O76024 890 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 ITGAMP11215 1152 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 RPS15AP62244 130 aaKnown RBP16.18■□□□□ 0.18
TRIM39-209ENST00000428728 DHX9Q08211 1270 aaKnown RBP16.18■□□□□ 0.18
TRIM39-209ENST00000428728 FAM53BQ14153 422 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 MINDY4Q4G0A6 757 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 LRRC8EQ6NSJ5 796 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 UGT3A1Q6NUS8 523 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 LANCL3Q6ZV70 420 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 PALM2Q8IXS6 379 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 SHISA5Q8N114 240 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 MYO1HQ8N1T3 1032 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 MCOLN3Q8TDD5 553 aa16.18■□□□□ 0.18
TRIM39-209ENST00000428728 ACTRT1Q8TDG2 376 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms