RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 FPGTO14772 594 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ACOX3O15254 700 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 SOCS5O75159 536 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 POP7O75817 140 aaKnown RBP8.09□□□□□ -1.11
CD44-208ENST00000428726 NPPAP01160 153 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 KRT6AP02538 564 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 C9P02748 559 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 KRT6BP04259 564 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ANXA4P09525 319 aaPredicted RBP8.09□□□□□ -1.11
CD44-208ENST00000428726 C8orf89P0DMQ9 161 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 BMP2P12643 396 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 IL12RB1P42701 662 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 RPS9P46781 194 aaKnown RBP8.09□□□□□ -1.11
CD44-208ENST00000428726 KRT6CP48668 564 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 EMX2Q04743 252 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ACSM2AQ08AH3 577 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ZNF750Q32MQ0 723 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ARHGAP15Q53QZ3 475 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 PERM1Q5SV97 790 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 FRG2Q64ET8 278 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ACSM2BQ68CK6 577 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 SULT1C3Q6IMI6 304 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 NOXRED1Q6NXP6 359 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 CEP68Q76N32 757 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 GPR180Q86V85 440 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 DHRSXQ8N5I4 330 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 PDPRQ8NCN5 879 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 HUS1BQ8NHY5 278 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 SPPL2AQ8TCT8 520 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ASB11Q8WXH4 323 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 RAB8BQ92930 207 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ISOC1Q96CN7 298 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 MRGPRX3Q96LB0 322 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 FRG2BQ96QU4 278 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 PRR14Q9BWN1 585 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 PBX4Q9BYU1 374 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 SLC2A11Q9BYW1 496 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 PLA2G2FQ9BZM2 168 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 TOR3AQ9H497 397 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 CXorf21Q9HAI6 301 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 NTN4Q9HB63 628 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 IMP3Q9NV31 184 aaKnown RBP8.09□□□□□ -1.11
CD44-208ENST00000428726 ZNF510Q9Y2H8 683 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 TDRD6O60522 2096 aaKnown RBP8.09□□□□□ -1.11
CD44-208ENST00000428726 FRYQ5TBA9 3013 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 A0A1W2PS29 197 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 KRBA1A5PL33 1030 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 CARNS1A5YM72 827 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 GRXCR2A6NFK2 248 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 H0Y8X5 98 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 H3BNH8 94 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 H7BY64 318 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 HYAL3O43820 417 aaPredicted RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 ACP5P13686 325 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 TPP2P29144 1249 aaPredicted RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 NUDT6P53370 316 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PRAMEF14Q5SWL7 426 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 MPP7Q5T2T1 576 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 EGFLAMQ63HQ2 1017 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 C16orf87Q6PH81 154 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PIWIL3Q7Z3Z3 882 aaKnown RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 BTLAQ7Z6A9 289 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ZNF761Q86XN6 746 aaPredicted RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 CPXM2Q8N436 756 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 DEFB119Q8N690 84 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 AMER3Q8N944 861 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 SLC47A1Q96FL8 570 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PRAP1Q96NZ9 151 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ROGDIQ9GZN7 287 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 AGPAT4Q9NRZ5 378 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 CUEDC1Q9NWM3 386 aaPredicted RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 HS3ST2Q9Y278 367 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 TESMINQ9Y4I5 508 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ELOVL7A1L3X0 281 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 MID1O15344 667 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PRAMEF10O60809 474 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 NTN1O95631 604 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ALBP02768 609 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 GPIP06744 558 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ANXA6P08133 673 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 C6P13671 934 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ETFAP13804 333 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ZNF8P17098 575 aaPredicted RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 POU1F1P28069 291 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 RFC2P35250 354 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PPM1AP35813 382 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 CCT8P50990 548 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 CLDN2P57739 230 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 EEFSECP57772 596 aaKnown RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 TXNL4AP83876 142 aaKnown RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 IL5RAQ01344 420 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ITGADQ13349 1161 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PWP1Q13610 501 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 SLBPQ14493 270 aaKnown RBP eCLIP8.08□□□□□ -1.12
CD44-208ENST00000428726 ZNF234Q14588 700 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PON2Q15165 354 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 GPR33Q49SQ1 333 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 AASDHQ4L235 1098 aaPredicted RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 USP39Q53GS9 565 aaKnown RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 PPP4R4Q6NUP7 873 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms