RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ABLIM1O14639 778 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 G6PDP11413 515 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 RPS9P46781 194 aaKnown RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 VSX2P58304 361 aaPredicted RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 MED22Q15528 200 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 PDCD4Q53EL6 469 aaKnown RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 RPTNQ6XPR3 784 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 TICAM1Q8IUC6 712 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 FAM47BQ8NA70 645 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 FAM156AQ8NDB6 213 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 C17orf62Q9BQA9 187 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 FAM192AQ9GZU8 254 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 CXorf56Q9H5V9 222 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 PDE7BQ9NP56 450 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 SERINC1Q9NRX5 453 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 MKL2Q9ULH7 1088 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 OR1A2Q9Y585 309 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 KIF1CO43896 1103 aaKnown RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 CYP17A1P05093 508 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 CASP9P55211 416 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 MEF2AQ02078 507 aaPredicted RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 GPR68Q15743 365 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 SLC34A3Q8N130 599 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 AMER2Q8N7J2 671 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 SEC14L1Q92503 715 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 SH3GL3Q99963 347 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 APBB3O95704 486 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 PKDCCQ504Y2 493 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 KLHL24Q6TFL4 600 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 UNC5DQ6UXZ4 953 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 PAQR9Q6ZVX9 377 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 RPS27LQ71UM5 84 aaKnown RBP13.44□□□□□ -0.26
RPL28-202ENST00000426763 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 CBARPQ8N350 705 aaPredicted RBP13.44□□□□□ -0.26
RPL28-202ENST00000426763 ACTL8Q9H568 366 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 CRNNQ9UBG3 495 aaPredicted RBP13.44□□□□□ -0.26
RPL28-202ENST00000426763 IKZF2Q9UKS7 526 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 A0A1B0GW55 424 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 ELOA3DA6NLF2 546 aaPredicted RBP13.44□□□□□ -0.26
RPL28-202ENST00000426763 DUX4L2P0CJ85 424 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 DUX4L3P0CJ86 424 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 DUX4L4P0CJ87 422 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 DUX4L5P0CJ88 424 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 DUX4L6P0CJ89 424 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 DUX4L7P0CJ90 424 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 UFM1P61960 85 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 ELOA3BQ3SY89 546 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 THAP5Q7Z6K1 395 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 NPAS3Q8IXF0 933 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 TMEM156Q8N614 296 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 ELOA3Q8NG57 546 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 CPEB1Q9BZB8 566 aaKnown RBP13.44□□□□□ -0.26
RPL28-202ENST00000426763 MTG2Q9H4K7 406 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 DUX4Q9UBX2 424 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 DLGAP4Q9Y2H0 992 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 ACTL7AQ9Y615 435 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 ALDOAP04075 364 aaKnown RBP13.44□□□□□ -0.26
RPL28-202ENST00000426763 DECR1Q16698 335 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 ZNF542PQ5EBM4 170 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 EPB41L1Q9H4G0 881 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 SSR3Q9UNL2 185 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 POMPQ9Y244 141 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 ADAMTS7Q9UKP4 1686 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 PGRP06401 933 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 CEP78Q5JTW2 689 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 RSBN1Q5VWQ0 802 aaPredicted RBP13.44□□□□□ -0.26
RPL28-202ENST00000426763 SPPL3Q8TCT6 385 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 NAT14Q8WUY8 206 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 ELL3Q9HB65 397 aaPredicted RBP13.44□□□□□ -0.26
RPL28-202ENST00000426763 RASSF1Q9NS23 344 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 DNAJB9Q9UBS3 223 aa13.44□□□□□ -0.26
RPL28-202ENST00000426763 EIF3FO00303 357 aaPredicted RBP13.43□□□□□ -0.26
RPL28-202ENST00000426763 SCDO00767 359 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 SMAD6O43541 496 aaKnown RBP13.43□□□□□ -0.26
RPL28-202ENST00000426763 CDKN2DP55273 166 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 TBPL1P62380 186 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 OLR1P78380 273 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 ENPP2Q13822 863 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 C11orf88Q6PI97 169 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 VN1R2Q8NFZ6 395 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 MMABQ96EY8 250 aaPredicted RBP13.43□□□□□ -0.26
RPL28-202ENST00000426763 CHID1Q9BWS9 393 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 ZNF395Q9H8N7 513 aaPredicted RBP13.43□□□□□ -0.26
RPL28-202ENST00000426763 DDX60LQ5H9U9 1706 aaKnown RBP13.43□□□□□ -0.26
RPL28-202ENST00000426763 AQP12BA6NM10 295 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 FAM170BA6NMN3 283 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 LDB2O43679 373 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 TPST2O60704 377 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 GBAP04062 536 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 ASGR2P07307 311 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 SLC35E2BP0CK96 405 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 HOXC12P31275 282 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 FAM78AQ5JUQ0 283 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 ADGRG6Q86SQ4 1221 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 AQP12AQ8IXF9 295 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 OR4C6Q8NH72 309 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 LRTOMTQ8WZ04 291 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 SMPDL3BQ92485 455 aa13.43□□□□□ -0.26
RPL28-202ENST00000426763 GTPBP3Q969Y2 492 aaKnown RBP13.43□□□□□ -0.26
RPL28-202ENST00000426763 TGM7Q96PF1 710 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms