RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 INSL5Q9Y5Q6 135 aa12.96□□□□□ -0.34
USP42-203ENST00000426246 ILVBLA1L0T0 632 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 J3KTA2 159 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 RGS10O43665 173 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 URODP06132 367 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 ETV3P41162 512 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 CREMQ03060 361 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 CDK5R2Q13319 367 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 ACOX1Q15067 660 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 ZNF548Q8NEK5 533 aaPredicted RBP12.95□□□□□ -0.34
USP42-203ENST00000426246 FAR1Q8WVX9 515 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 BADQ92934 168 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 RHBDF1Q96CC6 855 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 TRIB3Q96RU7 358 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 P2RY13Q9BPV8 354 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 COPS4Q9BT78 406 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 RAD18Q9NS91 495 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 FAIMQ9NVQ4 179 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 THUMPD1Q9NXG2 353 aaKnown RBP12.95□□□□□ -0.34
USP42-203ENST00000426246 GPR83Q9NYM4 423 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 FZD4Q9ULV1 537 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 TMA7Q9Y2S6 64 aaKnown RBP12.95□□□□□ -0.34
USP42-203ENST00000426246 MAGEB17A8MXT2 336 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 SLC28A1O00337 649 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 RTCAO00442 366 aaKnown RBP12.95□□□□□ -0.34
USP42-203ENST00000426246 CCL16O15467 120 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 TULP3O75386 442 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 F11P03951 625 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 FABP3P05413 133 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 CTSAP10619 480 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 CKMT1AP12532 417 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 HPCAL1P37235 193 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 SPAM1P38567 509 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 CSRP3P50461 194 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 SKIV2LQ15477 1246 aaKnown RBP12.95□□□□□ -0.34
USP42-203ENST00000426246 FAM214AQ32MH5 1076 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 OR2T5Q6IEZ7 315 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 LILRA6Q6PI73 481 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 DPY19L3Q6ZPD9 716 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 SPATC1Q76KD6 591 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 OR2T29Q8NH02 315 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 MRPS31Q92665 395 aaKnown RBP12.95□□□□□ -0.34
USP42-203ENST00000426246 TMEM159Q96B96 161 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 TADA1Q96BN2 335 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 KLF16Q9BXK1 252 aaPredicted RBP12.95□□□□□ -0.34
USP42-203ENST00000426246 BEX2Q9BXY8 128 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 FBXO10Q9UK96 956 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 SNX6Q9UNH7 406 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 HELZP42694 1942 aaKnown RBP12.95□□□□□ -0.34
USP42-203ENST00000426246 KRBA1A5PL33 1030 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 EFCAB9A8MZ26 197 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 IGSF6O95976 241 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 OR56A5P0C7T3 313 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 S100A5P33763 92 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 TTKP33981 857 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 HMGCLP35914 325 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 SLC19A1P41440 591 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 CTSKP43235 329 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 ADARB1P78563 741 aaKnown RBP12.95□□□□□ -0.34
USP42-203ENST00000426246 MOGQ16653 247 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 DGUOKQ16854 277 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 SPDYE7PQ495Y7 208 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 TMEM240Q5SV17 173 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 OR9Q2Q8NGE9 314 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 YIPF4Q9BSR8 244 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 PDFQ9HBH1 243 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 MRPL17Q9NRX2 175 aaKnown RBP12.95□□□□□ -0.34
USP42-203ENST00000426246 MALT1Q9UDY8 824 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 PADI4Q9UM07 663 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 ATG2AQ2TAZ0 1938 aa12.95□□□□□ -0.34
USP42-203ENST00000426246 KPNA4O00629 521 aaPredicted RBP12.94□□□□□ -0.34
USP42-203ENST00000426246 TGM5O43548 720 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 AIREO43918 545 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 CBFA2T3O75081 653 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 OLFM2O95897 454 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 STSP08842 583 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 ETFAP13804 333 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 SDC1P18827 310 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 RCVRNP35243 200 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 PPM1AP35813 382 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 RPP38P78345 283 aaKnown RBP12.94□□□□□ -0.34
USP42-203ENST00000426246 ADPRMQ3LIE5 342 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 DGKKQ5KSL6 1271 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 CXorf57Q6NSI4 855 aaKnown RBP12.94□□□□□ -0.34
USP42-203ENST00000426246 SNX20Q7Z614 316 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 OR4A15Q8NGL6 344 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 RAB8BQ92930 207 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 IL17FQ96PD4 163 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 ABCB9Q9NP78 766 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 STOML2Q9UJZ1 356 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 MAFFQ9ULX9 164 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 ANKDD1BA6NHY2 528 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 GFRA2O00451 464 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 IL6P05231 212 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 RFX3P48380 749 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 MRPS15P82914 257 aaKnown RBP12.94□□□□□ -0.34
USP42-203ENST00000426246 XKR7Q5GH72 579 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 NOXRED1Q6NXP6 359 aa12.94□□□□□ -0.34
USP42-203ENST00000426246 ZSWIM9Q86XI8 627 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms