RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.05□□□□□ -0.161e-6■■□□□ 11.9
RPS28-201ENST00000417088 ABCF3Q9NUQ8 709 aa14.05□□□□□ -0.16
RPS28-201ENST00000417088 MKL2Q9ULH7 1088 aa14.05□□□□□ -0.16
RPS28-201ENST00000417088 VPS9D1Q9Y2B5 631 aa14.05□□□□□ -0.16
RPS28-201ENST00000417088 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.04□□□□□ -0.16
RPS28-201ENST00000417088 FAM237BA0A1B0GVD1 139 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 ARHGAP10A1A4S6 786 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 GFYI3L273 518 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 HNRNPRO43390 633 aaKnown RBP14.04□□□□□ -0.16
RPS28-201ENST00000417088 CEP104O60308 925 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 SYF2O95926 243 aaKnown RBP14.04□□□□□ -0.16
RPS28-201ENST00000417088 UQCRHP07919 91 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 MPC1LP0DKB6 136 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 PRF1P14222 555 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 TNFRSF8P28908 595 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 VPS41P49754 854 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 SARNPP82979 210 aaKnown RBP14.04□□□□□ -0.16
RPS28-201ENST00000417088 CUL1Q13616 776 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 DHX34Q14147 1143 aaKnown RBP14.04□□□□□ -0.16
RPS28-201ENST00000417088 ANKRD22Q5VYY1 191 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 ZNF470Q6ECI4 717 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 CASC4Q6P4E1 433 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 ZNF549Q6P9A3 640 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 ADCK2Q7Z695 626 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 DENND6AQ8IWF6 608 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 PRELID2Q8N945 189 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 MARVELD3Q96A59 401 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 RNF32Q9H0A6 362 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 LZTFL1Q9NQ48 299 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 HOMER3Q9NSC5 361 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 KLHL42Q9P2K6 505 aa14.04□□□□□ -0.16
RPS28-201ENST00000417088 ZCWPW2A0A1B0GU75 182 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 CTAGE9A4FU28 777 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 H7BY64 318 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 STATHP02808 62 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 ICAM2P13598 275 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 MST1P26927 711 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 IMPA1P29218 277 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 SKIV2L2P42285 1042 aaKnown RBP14.03□□□□□ -0.16
RPS28-201ENST00000417088 SRSF11Q05519 484 aaKnown RBP14.03□□□□□ -0.16
RPS28-201ENST00000417088 GPS1Q13098 491 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 CTBP1Q13363 440 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 NDUFA9Q16795 377 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 THEMIS2Q5TEJ8 643 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 HIBCHQ6NVY1 386 aaPredicted RBP14.03□□□□□ -0.16
RPS28-201ENST00000417088 GFRALQ6UXV0 394 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 ZNF662Q6ZS27 426 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 SHISA5Q8N114 240 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 OR9A4Q8NGU2 314 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 KCNJ9Q92806 393 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 ZNF669Q96BR6 464 aaPredicted RBP14.03□□□□□ -0.16
RPS28-201ENST00000417088 PRAP1Q96NZ9 151 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 EBNA1BP2Q99848 306 aaKnown RBP14.03□□□□□ -0.16
RPS28-201ENST00000417088 TUBB6Q9BUF5 446 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 VN1R1Q9GZP7 353 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 FBXO6Q9NRD1 293 aaPredicted RBP14.03□□□□□ -0.16
RPS28-201ENST00000417088 SAMD15Q9P1V8 674 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 ABI3Q9P2A4 366 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 COPG2Q9UBF2 871 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 DHRS7Q9Y394 339 aa14.03□□□□□ -0.16
RPS28-201ENST00000417088 MAGEB16A2A368 324 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 OR5H15A6NDH6 313 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 PRSS44E7EML9 344 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 H0YIG0 161 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 ZBTB14O43829 449 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 PRAMEF2O60811 474 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 RASAL1O95294 804 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 C8orf89P0DMQ9 161 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 ENO3P13929 434 aaPredicted RBP14.02□□□□□ -0.17
RPS28-201ENST00000417088 CXCR5P32302 372 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 AVPR1BP47901 424 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 AP2B1P63010 937 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 THOC5Q13769 683 aaKnown RBP14.02□□□□□ -0.17
RPS28-201ENST00000417088 ABHD17BQ5VST6 288 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 TTC27Q6P3X3 843 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 PRSS41Q7RTY9 318 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 PIWIL4Q7Z3Z4 852 aaKnown RBP14.02□□□□□ -0.17
RPS28-201ENST00000417088 VN1R4Q7Z5H5 301 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 DNAJB8Q8NHS0 232 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 CD200R1Q8TD46 325 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 METTL21AQ8WXB1 218 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 CYTH2Q99418 400 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 GPR21Q99679 349 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 UNKQ9C0B0 810 aaKnown RBP14.02□□□□□ -0.17
RPS28-201ENST00000417088 CCDC68Q9H2F9 335 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 TMEM184CQ9NVA4 438 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 STMN3Q9NZ72 180 aa14.02□□□□□ -0.17
RPS28-201ENST00000417088 CPAMD8Q8IZJ3 1885 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 APCP25054 2843 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 KCNE1BA0A087WTH5 132 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 TRGV8A0A0C4DH27 118 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 IGHV3-20A0A0C4DH32 117 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 SDR42E2A6NKP2 422 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 KIF5CO60282 957 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 SEC24DO94855 1032 aaPredicted RBP14.01□□□□□ -0.17
RPS28-201ENST00000417088 UNC5CO95185 931 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 NSA2O95478 260 aaKnown RBP14.01□□□□□ -0.17
RPS28-201ENST00000417088 CRYABP02511 175 aaKnown RBP14.01□□□□□ -0.17
RPS28-201ENST00000417088 KRT14P02533 472 aa14.01□□□□□ -0.17
RPS28-201ENST00000417088 MLNP12872 115 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms