RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 TARM1B6A8C7 271 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 KLK8O60259 260 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SURF6O75683 361 aaKnown RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 DDHD2O94830 711 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 CLDN7O95471 211 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 TGFAP01135 160 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 HLA-DQA2P01906 255 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 CA3P07451 260 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 F7P08709 466 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 CHRNB1P11230 501 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SFPQP23246 707 aaKnown RBP eCLIP2.46□□□□□ -2.02
MCF2-204ENST00000414978 FASLGP48023 281 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SERPINH1P50454 418 aaKnown RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 LIPEQ05469 1076 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 DMTNQ08495 405 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ZNF268Q14587 947 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 SIGIRRQ6IA17 410 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 HEPHL1Q6MZM0 1159 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ANKRD54Q6NXT1 300 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 VWA1Q6PCB0 445 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ZNF793Q6ZN11 406 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 RBM44Q6ZP01 1051 aaKnown RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 TMPRSS11FQ6ZWK6 438 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ABI3BPQ7Z7G0 1075 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 CHSY1Q86X52 802 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 GPSM1Q86YR5 675 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SPERTQ8NA61 448 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 HASPINQ8TF76 798 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 EXT2Q93063 718 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 MAGED4Q96JG8 741 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SPATA33Q96N06 139 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 MUS81Q96NY9 551 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 PSKH2Q96QS6 385 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 KCNK16Q96T55 309 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 RAD9AQ99638 391 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 BDH2Q9BUT1 245 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 PAPOLBQ9NRJ5 636 aaKnown RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 TBC1D7Q9P0N9 293 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SERGEFQ9UGK8 458 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 MUTYHQ9UIF7 546 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 LEF1Q9UJU2 399 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 KCNS2Q9ULS6 477 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 LAMP3Q9UQV4 416 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 RNF103-CHMP3A0A140T963 221 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 PRSS51A0A1B0GVH4 220 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 HTR3EA5X5Y0 456 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 RNF103O00237 685 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ZIC3O60481 467 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ZNF623O75123 536 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 PEX11AO75192 247 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ZNF254O75437 659 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 NXPH3O95157 252 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 AK1P00568 194 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 MMP1P03956 469 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 FGF4P08620 206 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 TPBGLP0DKB5 382 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ACP2P11117 423 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 CKMT2P17540 419 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 GNAZP19086 355 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 BDKRB2P30411 391 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 MAGEA4P43358 317 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 CLCN4P51793 760 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 TOB2Q14106 344 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 CBWD6Q4V339 395 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 CBWD3Q5JTY5 395 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 PRAMEF17Q5VTA0 474 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 CYB5D1Q6P9G0 228 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ZNF474Q6S9Z5 364 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 CD300LGQ6UXG3 332 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 PACS1Q6VY07 963 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ZNF517Q6ZMY9 492 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 MTSS1LQ765P7 747 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SERPINA11Q86U17 422 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 Q8TCH9 128 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ATP8B4Q8TF62 1192 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 UBLCP1Q8WVY7 318 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 CXorf58Q96LI9 332 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ZNF583Q96ND8 569 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 C19orf43Q9BQ61 176 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 GON7Q9BXV9 100 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 PUS3Q9BZE2 481 aaKnown RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 COQ10BQ9H8M1 238 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ACTR8Q9H981 624 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 RNPEPL1Q9HAU8 725 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 YAE1D1Q9NRH1 226 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 TMEM161AQ9NX61 479 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 DBNLQ9UJU6 430 aaKnown RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 CDC14AQ9UNH5 594 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 A0A1W2PN81 502 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 LINC01553A4QN01 128 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 ANKUB1A6NFN9 424 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 OTOL1A6NHN0 477 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 ZNF264O43296 627 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 GMFGO60234 142 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 RNF8O76064 485 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 PLGP00747 810 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 MX1P20591 662 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 PAICSP22234 425 aaKnown RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 SSTR1P30872 391 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 CHRNA7P36544 502 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms