RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PPP1R2P1Q96PQ5 205 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 ZFYVE21Q9BQ24 234 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 VKORC1Q9BQB6 163 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 FERMT1Q9BQL6 677 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 TRIM51Q9BSJ1 452 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 TUBB6Q9BUF5 446 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 TGIF2Q9GZN2 237 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 MKKSQ9NPJ1 570 aaPredicted RBP9.05□□□□□ -0.96
RFFL-203ENST00000413582 KLHL1Q9NR64 748 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 STMN3Q9NZ72 180 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 TNFRSF10DQ9UBN6 386 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 SLC39A10Q9ULF5 831 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 NPIPA1Q9UND3 350 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 CDC14AQ9UNH5 594 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 RUVBL1Q9Y265 456 aaKnown RBP9.05□□□□□ -0.96
RFFL-203ENST00000413582 NSD1Q96L73 2696 aaPredicted RBP9.04□□□□□ -0.96
RFFL-203ENST00000413582 A0A1W2PPV9 198 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 TCRBV7S2A1N4TA0A589 114 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 CCDC162PA2VCL2 907 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 FAM221AA4D161 298 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 C2orf72A6NCS6 295 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 EFCAB8A8MWE9 144 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 H0YGG7 62 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 FOXS1O43638 330 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 ZNF189O75820 626 aaPredicted RBP9.04□□□□□ -0.96
RFFL-203ENST00000413582 STK10O94804 968 aaKnown RBP9.04□□□□□ -0.96
RFFL-203ENST00000413582 SEC24DO94855 1032 aaPredicted RBP9.04□□□□□ -0.96
RFFL-203ENST00000413582 SLCO2B1O94956 709 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 MLYCDO95822 493 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 FGGP02679 453 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 RBP3P10745 1247 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 ABOP16442 354 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 BDKRB1P46663 353 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 ARF3P61204 181 aaPredicted RBP9.04□□□□□ -0.96
RFFL-203ENST00000413582 YBX1P67809 324 aaKnown RBP9.04□□□□□ -0.96
RFFL-203ENST00000413582 HSF1Q00613 529 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 CYP1B1Q16678 543 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 SYT16Q17RD7 645 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 ACER2Q5QJU3 275 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 PLAG1Q6DJT9 500 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 C3P1Q6ZMU1 363 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 LANCL3Q6ZV70 420 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 FGD2Q7Z6J4 655 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 DOLPP1Q86YN1 238 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 ARHGEF39Q8N4T4 335 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 CSNK1A1LQ8N752 337 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 SPATA4Q8NEY3 305 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 OR13J1Q8NGT2 312 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 OR2A1Q8NGT9 310 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 HMGCLL1Q8TB92 370 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 CA5BP1Q8WTZ4 195 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 ASZ1Q8WWH4 475 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 FAM118BQ9BPY3 351 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 NPDC1Q9NQX5 325 aaPredicted RBP9.04□□□□□ -0.96
RFFL-203ENST00000413582 PIH1D1Q9NWS0 290 aaKnown RBP9.04□□□□□ -0.96
RFFL-203ENST00000413582 MKL2Q9ULH7 1088 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 PPT2Q9UMR5 302 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 ZNF407Q9C0G0 2248 aa9.04□□□□□ -0.96
RFFL-203ENST00000413582 IGHV3-20A0A0C4DH32 117 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 A0A1B0GTL3 188 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 IQCF5A8MTL0 148 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 A8MUI8 341 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 ASNA1O43681 348 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 MAN1A2O60476 641 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 C1orf105O95561 183 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 TSPAN12O95859 305 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 GOT2P00505 430 aaKnown RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 APOA4P06727 396 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 C8orf89P0DMQ9 161 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 AOAHP28039 575 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 EEF1DP29692 281 aaKnown RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 DNAJA1P31689 397 aaKnown RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 ST13P50502 369 aaKnown RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 EIF3EP60228 445 aaKnown RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 MAT1AQ00266 395 aaKnown RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 TFF3Q07654 80 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 OR1C1Q15619 314 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 CCNG2Q16589 344 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 HKDC1Q2TB90 917 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 BTBD16Q32M84 506 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 CCSMST1Q4G0I0 132 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 GLE1Q53GS7 698 aaKnown RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 GARNL3Q5VVW2 1013 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 H3F3CQ6NXT2 135 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 FBXO42Q6P3S6 717 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 DRICH1Q6PGQ1 229 aaPredicted RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 AFTPHQ6ULP2 937 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 KRT222Q8N1A0 295 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 GHDCQ8N2G8 530 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 MMGT1Q8N4V1 131 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 NRGNQ92686 78 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 RAD51AP1Q96B01 352 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 LRRC45Q96CN5 670 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 MMABQ96EY8 250 aaPredicted RBP9.03□□□□□ -0.96
RFFL-203ENST00000413582 MS4A14Q96JA4 679 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 CAPZA3Q96KX2 299 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 ZNF354BQ96LW1 612 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 NPAS2Q99743 824 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 DPH7Q9BTV6 452 aa9.03□□□□□ -0.96
RFFL-203ENST00000413582 YIPF2Q9BWQ6 316 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms