RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 ATP1A2P50993 1020 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 RPS15AP62244 130 aaKnown RBP13.33□□□□□ -0.28
CPNE1-206ENST00000412056 RELAQ04206 551 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 PDK4Q16654 411 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 PRTGQ2VWP7 1150 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 KRT71Q3SY84 523 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 TCTE1Q5JU00 501 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 BEND6Q5SZJ8 279 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-206ENST00000412056 PRAMEF9Q5VWM5 478 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 NXPE4Q6UWF7 544 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 LRRC69Q6ZNQ3 347 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 SLCO4C1Q6ZQN7 724 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 VN1R4Q7Z5H5 301 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 TRABD2AQ86V40 505 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 LCA5Q86VQ0 697 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 C4orf33Q8N1A6 199 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 ESX1Q8N693 406 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 IL22RA1Q8N6P7 574 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 CSNK1A1LQ8N752 337 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 ZNF740Q8NDX6 193 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 OR4K1Q8NGD4 311 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 ZBTB9Q96C00 473 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 PHF21BQ96EK2 531 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 ZIM3Q96PE6 472 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 AKIRIN1Q9H9L7 192 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-206ENST00000412056 GPRC5BQ9NZH0 403 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 OPTCQ9UBM4 332 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 DHCR7Q9UBM7 475 aaKnown RBP13.33□□□□□ -0.28
CPNE1-206ENST00000412056 EMCNQ9ULC0 261 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 PCDHGA4Q9Y5G9 962 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 AP1M2Q9Y6Q5 423 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 SCN2AQ99250 2005 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 A0A087WV48 116 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 LOC101059948A0A1B0GTJ6 334 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 TRBC2A0A5B9 178 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 FITM1A5D6W6 292 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 A8MT66 165 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 K7EPI3 171 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 CLGNO14967 610 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 SMIM24O75264 130 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 SIX3O95343 332 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-206ENST00000412056 MED26O95402 600 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 C1GALT1C1LP0DN25 315 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 KRT4P19013 534 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 GNAZP19086 355 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 EEF1DP29692 281 aaKnown RBP13.32□□□□□ -0.28
CPNE1-206ENST00000412056 STAT5AP42229 794 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 TLE3Q04726 772 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 GRM7Q14831 915 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 PCBP2Q15366 365 aaKnown RBP eCLIP13.32□□□□□ -0.282e-7■■□□□ 12.7
CPNE1-206ENST00000412056 HKDC1Q2TB90 917 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 C1orf189Q5VU69 101 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 ZNF385CQ66K41 422 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-206ENST00000412056 LCN10Q6JVE6 187 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 RHBDD2Q6NTF9 364 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 DSELQ8IZU8 1212 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 IQCKQ8N0W5 287 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 DTWD1Q8N5C7 304 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 TEX9Q8N6V9 391 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 TTC29Q8NA56 475 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-206ENST00000412056 MFSD9Q8NBP5 474 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 RERGQ96A58 199 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-206ENST00000412056 LRFN5Q96NI6 719 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 AIF1LQ9BQI0 150 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 DPH1Q9BZG8 443 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 LHX9Q9NQ69 397 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 ENAMQ9NRM1 1142 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 CUTCQ9NTM9 273 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 TXLNGQ9NUQ3 528 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 DCDC2Q9UHG0 476 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 TMCO1Q9UM00 188 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 SRPK3Q9UPE1 567 aa13.32□□□□□ -0.28
CPNE1-206ENST00000412056 FRYQ5TBA9 3013 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 STX16-NPEPL1H3BU86 382 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 MEN1O00255 615 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 COPEO14579 308 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 STX16O14662 325 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 OR1F1O43749 312 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 HBQ1P09105 142 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 CD22P20273 847 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 GRK3P35626 688 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 SNRPNP63162 240 aaKnown RBP13.31□□□□□ -0.28
CPNE1-206ENST00000412056 SLC18A2Q05940 514 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 ABHD18Q0P651 414 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 SLBPQ14493 270 aaKnown RBP eCLIP13.31□□□□□ -0.28
CPNE1-206ENST00000412056 MANEAQ5SRI9 462 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 CEP85LQ5SZL2 805 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 ATG9BQ674R7 924 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 FAM199XQ6PEV8 388 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-206ENST00000412056 TTLL10Q6ZVT0 673 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 GOLGA7Q7Z5G4 137 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 SRRM1Q8IYB3 904 aaKnown RBP13.31□□□□□ -0.28
CPNE1-206ENST00000412056 MYRIPQ8NFW9 859 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 CT55Q8WUE5 264 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 MR1Q95460 341 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 THAP11Q96EK4 314 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 C10orf90Q96M02 699 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 GBP5Q96PP8 586 aa13.31□□□□□ -0.28
CPNE1-206ENST00000412056 RUFY1Q96T51 708 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms