RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 APOBEC3GQ9HC16 384 aaKnown RBP4.16□□□□□ -1.74
CLK1-203ENST00000409769 FAM207AQ9NSI2 230 aaPredicted RBP4.16□□□□□ -1.74
CLK1-203ENST00000409769 TMEM161AQ9NX61 479 aa4.16□□□□□ -1.74
CLK1-203ENST00000409769 DPP3Q9NY33 737 aa4.16□□□□□ -1.74
CLK1-203ENST00000409769 TUBGCP4Q9UGJ1 667 aa4.16□□□□□ -1.74
CLK1-203ENST00000409769 ITGA11Q9UKX5 1188 aa4.16□□□□□ -1.74
CLK1-203ENST00000409769 UBQLN1Q9UMX0 589 aaKnown RBP4.16□□□□□ -1.74
CLK1-203ENST00000409769 ADAM18Q9Y3Q7 739 aa4.16□□□□□ -1.74
CLK1-203ENST00000409769 KCNE2Q9Y6J6 123 aa4.16□□□□□ -1.74
CLK1-203ENST00000409769 ARL5CA6NH57 179 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 HNRNPCL2B2RXH8 293 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 F8VZ95 297 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 VCYO14598 125 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 JRKO75564 520 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 BAIAP3O94812 1187 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 SCGB1D1O95968 90 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 EIF2S1P05198 315 aaKnown RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 CSF2RAP15509 400 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 ANOS1P23352 680 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 PAX3P23760 479 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 PRKCIP41743 596 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 PIK3CAP42336 1068 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 ZNF132P52740 706 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 MYL6P60660 151 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 NOP14P78316 857 aaKnown RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 RBP5P82980 135 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 TFAMQ00059 246 aaKnown RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 LRMPQ12912 555 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 ZBTB17Q13105 803 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 CUL2Q13617 745 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 FRG1Q14331 258 aaKnown RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 UPP1Q16831 310 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 SGSM1Q2NKQ1 1148 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 ASTE1Q2TB18 679 aaPredicted RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 CDONQ4KMG0 1287 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 SPOPLQ6IQ16 392 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 WDR59Q6PJI9 974 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 CYP20A1Q6UW02 462 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 CD300LGQ6UXG3 332 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 GFRALQ6UXV0 394 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 DEFB128Q7Z7B8 93 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 NRROSQ86YC3 692 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 C1orf87Q8N0U7 546 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 BEST3Q8N1M1 668 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 PCDH20Q8N6Y1 951 aaKnown RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 LRRC52Q8N7C0 313 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 ZNF441Q8N8Z8 693 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 NEK11Q8NG66 645 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 OR8K1Q8NGG5 319 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 THAP6Q8TBB0 222 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 RSPH1Q8WYR4 309 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 SHC3Q92529 594 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 HDAC2Q92769 488 aaKnown RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 ABTB1Q969K4 478 aaPredicted RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 JAKMIP2Q96AA8 810 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 C18orf25Q96B23 403 aaPredicted RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 ZNF689Q96CS4 500 aaPredicted RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 FAM81BQ96LP2 452 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 CASD1Q96PB1 797 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 PANX2Q96RD6 677 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 NODALQ96S42 347 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 PCGF1Q9BSM1 259 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 SYT11Q9BT88 431 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 PI4K2AQ9BTU6 479 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 APOL6Q9BWW8 343 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 FAM124BQ9H5Z6 455 aaPredicted RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 EVA1AQ9H8M9 152 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 OLA1Q9NTK5 396 aaKnown RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 ACSS1Q9NUB1 689 aaPredicted RBP4.15□□□□□ -1.75
CLK1-203ENST00000409769 SLC38A7Q9NVC3 462 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 GDAP2Q9NXN4 497 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 EHD2Q9NZN4 543 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 AIPL1Q9NZN9 384 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 MALT1Q9UDY8 824 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 DNAJC12Q9UKB3 198 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 NENFQ9UMX5 172 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 AMDHD2Q9Y303 409 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 PSAT1Q9Y617 370 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 MAU2Q9Y6X3 613 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 CEP290O15078 2479 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 ATG2AQ2TAZ0 1938 aa4.15□□□□□ -1.75
CLK1-203ENST00000409769 PATJQ8NI35 1801 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 PLXNA4Q9HCM2 1894 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 PDE4DIPQ5VU43 2346 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 A0A1W2PS18 150 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 LIPT2A6NK58 231 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 PRAC2D3DTV9 90 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 TMEM189-UBE2V1I3L0A0 370 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 SPINT2O43291 252 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 SLC25A12O75746 678 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 DDHD2O94830 711 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 LCA5LO95447 670 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 TPM1P09493 284 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 RPL9P32969 192 aaKnown RBP4.14□□□□□ -1.75
CLK1-203ENST00000409769 PBX3P40426 434 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 USP8P40818 1118 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 TAF6P49848 677 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 MFAP3P55082 362 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 F2RL1P55085 397 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 DEFB103AP81534 67 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms