RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ACSM2AQ08AH3 577 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 LAPTM5Q13571 262 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ANGPT1Q15389 498 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 VPS26BQ4G0F5 336 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 KIAA1614Q5VZ46 1190 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ACSM2BQ68CK6 577 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 OGFOD2Q6N063 350 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 CYP20A1Q6UW02 462 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 TMEM26Q6ZUK4 368 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SPATA19Q7Z5L4 167 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 C11orf74Q86VG3 221 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 FAM129CQ86XR2 697 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 GATAD2AQ86YP4 633 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.56□□□□□ -1.841e-6■■■■■ 116
RTN4-208ENST00000404909 LIX1Q8N485 282 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ARL14Q8N4G2 192 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 CHCHD4Q8N4Q1 142 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 RBM15BQ8NDT2 890 aaKnown RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 HMGCLL1Q8TB92 370 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 STON2Q8WXE9 905 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 UBE2E3Q969T4 207 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SLC22A18Q96BI1 424 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SLC7A6OSQ96CW6 309 aaPredicted RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 RCN3Q96D15 328 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 TEX37Q96LM6 180 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 PPM1MQ96MI6 270 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 TSSK3Q96PN8 268 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ELF4Q99607 663 aaPredicted RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 SLC38A3Q99624 504 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 NPAS2Q99743 824 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 EHD1Q9H4M9 534 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ZNF385DQ9H6B1 395 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ACTR5Q9H9F9 607 aaPredicted RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 AIG1Q9NVV5 245 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 NOP53Q9NZM5 478 aaKnown RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 SUSD2Q9UGT4 822 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 PILRBQ9UKJ0 227 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 GPR45Q9Y5Y3 372 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SPTBP11277 2137 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 GNG14A0A1W2PPG7 69 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 HAT1O14929 419 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 CFLARO15519 480 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ZW10O43264 779 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 LCMT2O60294 686 aaKnown RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 RSL1D1O76021 490 aaKnown RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 SNRPB2P08579 225 aaKnown RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 PVRP15151 417 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 MAGP20916 626 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 GPX3P22352 226 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 PTPN4P29074 926 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 CTSKP43235 329 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 PPP1CAP62136 330 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 PHEXP78562 749 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 PLIN5Q00G26 463 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ACTN3Q08043 901 aaPredicted RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 MAD2L1Q13257 205 aaPredicted RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 ART3Q13508 389 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 GSTA3Q16772 222 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 FAM91A1Q658Y4 838 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ARMC6Q6NXE6 501 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SYT12Q8IV01 421 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SLC25A45Q8N413 288 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 KRTCAP2Q8N6L1 136 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 C1orf52Q8N6N3 182 aaKnown RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 ANKRD53Q8N9V6 530 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ABHD11Q8NFV4 315 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 OR2I1PQ8NGU4 316 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 RP9Q8TA86 221 aaKnown RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 RSC1A1Q92681 617 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 MCUR1Q96AQ8 359 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 VPS33AQ96AX1 596 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 WDR34Q96EX3 536 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 FCRL4Q96PJ5 515 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 BTBD10Q9BSF8 475 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SMOC1Q9H4F8 434 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 PELI2Q9HAT8 420 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 IL1RL2Q9HB29 575 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SLC6A20Q9NP91 592 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 DMRT3Q9NQL9 472 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SDR39U1Q9NRG7 319 aaPredicted RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 ZSCAN32Q9NX65 697 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 TAS2R1Q9NYW7 299 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ACTR10Q9NZ32 417 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 FBXO4Q9UKT5 387 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 DLGAP4Q9Y2H0 992 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 A0A0G2JN53 185 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 RHPN2P1A8MT19 583 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 AKAP10O43572 662 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 PRAMEF10O60809 474 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 CCNDBP1O95273 360 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SP9P0CG40 484 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 BCKDHAP12694 445 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 UGT2B7P16662 529 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 TACR1P25103 407 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 KCNK10P57789 538 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ABATP80404 500 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 BNC1Q01954 994 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 PCDH1Q08174 1060 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 CSTF3Q12996 717 aaKnown RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 GRIK2Q13002 908 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms