RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 TK2O00142 265 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 AGRPO00253 132 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 COPEO14579 308 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 HAT1O14929 419 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 RRP8O43159 456 aaKnown RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 HCRTR1O43613 425 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 H2AFYO75367 372 aaKnown RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 KIAA0754O94854 1291 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 SBK3P0C264 359 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 C1GALT1C1LP0DN25 315 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 ATP5F1P24539 256 aaPredicted RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 AHRP35869 848 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 EIF2S3P41091 472 aaKnown RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 ATP1A2P50993 1020 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 REEP5Q00765 189 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 LAPTM5Q13571 262 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 TNFAIP8L3Q5GJ75 292 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 C6orf15Q6UXA7 325 aaPredicted RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 ZNF517Q6ZMY9 492 aaPredicted RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 ADCK2Q7Z695 626 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 ZNF655Q8N720 491 aaPredicted RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 TTC29Q8NA56 475 aaPredicted RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 TTLQ8NG68 377 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 RERGQ96A58 199 aaPredicted RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 PGM2Q96G03 612 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 EFHD1Q9BUP0 239 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 EFCAB11Q9BUY7 163 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 ACTR5Q9H9F9 607 aaPredicted RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 ABCF3Q9NUQ8 709 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 CPSF2Q9P2I0 782 aaKnown RBP16.9■□□□□ 0.3
CTNS-203ENST00000399306 SH2B3Q9UQQ2 575 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 PCDHGA4Q9Y5G9 962 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 ACTL7BQ9Y614 415 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 DMXL2Q8TDJ6 3036 aa16.9■□□□□ 0.3
CTNS-203ENST00000399306 A0A087WV48 116 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 A0A0J9YVX5 310 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 H0YGG7 62 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 RGS16O15492 202 aaPredicted RBP16.89■□□□□ 0.29
CTNS-203ENST00000399306 ZNF749O43361 778 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 CCNT2O60583 730 aaKnown RBP16.89■□□□□ 0.29
CTNS-203ENST00000399306 RAD1O60671 282 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 UGDHO60701 494 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 TIAF1O95411 115 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 ONECUT2O95948 504 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 EPB42P16452 691 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 RORAP35398 523 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 ARF3P61204 181 aaPredicted RBP16.89■□□□□ 0.29
CTNS-203ENST00000399306 DEFB110Q30KQ9 67 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 C18orf21Q32NC0 220 aaPredicted RBP16.89■□□□□ 0.29
CTNS-203ENST00000399306 TMPRSS11BQ86T26 416 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 ZFAND4Q86XD8 727 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 KRT78Q8N1N4 520 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 PTGR2Q8N8N7 351 aaPredicted RBP16.89■□□□□ 0.29
CTNS-203ENST00000399306 BANPQ8N9N5 519 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 MFSD9Q8NBP5 474 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 CAMKVQ8NCB2 501 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 KCNE4Q8WWG9 221 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 TM4SF19Q96DZ7 209 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 MVB12AQ96EY5 273 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 PTCD3Q96EY7 689 aaKnown RBP16.89■□□□□ 0.29
CTNS-203ENST00000399306 APOPT1Q96IL0 206 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 C17orf62Q9BQA9 187 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 NDC1Q9BTX1 674 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 NLNQ9BYT8 704 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 STMN4Q9H169 189 aaPredicted RBP16.89■□□□□ 0.29
CTNS-203ENST00000399306 SSU72Q9NP77 194 aaKnown RBP16.89■□□□□ 0.29
CTNS-203ENST00000399306 PADI1Q9ULC6 663 aa16.89■□□□□ 0.29
CTNS-203ENST00000399306 MAP1BP46821 2468 aaKnown RBP16.89■□□□□ 0.29
CTNS-203ENST00000399306 A8MT66 165 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 E2F3O00716 465 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 PLIN3O60664 434 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 WFS1O76024 890 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 PROCP04070 461 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 KLK3P07288 261 aaPredicted RBP16.88■□□□□ 0.29
CTNS-203ENST00000399306 CCNYL3P0C7X3 344 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 H2AFXP16104 143 aaPredicted RBP16.88■□□□□ 0.29
CTNS-203ENST00000399306 ZNF28P17035 718 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 SCTRP47872 440 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 AGTR2P50052 363 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 VSX2P58304 361 aaPredicted RBP16.88■□□□□ 0.29
CTNS-203ENST00000399306 CLN3Q13286 438 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 PWP1Q13610 501 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 PAGE2BQ5JRK9 111 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 WASHC2DQ5SRD0 308 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 CATSPEREQ5SY80 951 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 CEP85LQ5SZL2 805 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 FRMPD2BQ6IN97 320 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 SNX31Q8N9S9 440 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 TRPV3Q8NET8 790 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 NKD1Q969G9 470 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 UBE2E3Q969T4 207 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 MAGEB10Q96LZ2 347 aaPredicted RBP16.88■□□□□ 0.29
CTNS-203ENST00000399306 SMC6Q96SB8 1091 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 SLC7A5P2Q9GIP4 190 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 SPRTNQ9H040 489 aaPredicted RBP16.88■□□□□ 0.29
CTNS-203ENST00000399306 ZFP69BQ9UJL9 534 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 EMCNQ9ULC0 261 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 TSC22D4Q9Y3Q8 395 aa16.88■□□□□ 0.29
CTNS-203ENST00000399306 LOC105369274A0A096LPK9 316 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 LOC102723532A0A0G2JNH3 316 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms