RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 GSTT1P30711 240 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 RPS9P46781 194 aaKnown RBP15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 MMP21Q8N119 569 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 TRPV3Q8NET8 790 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 FRS2Q8WU20 508 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 MKRN2Q9H000 416 aaKnown RBP15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 CUEDC1Q9NWM3 386 aaPredicted RBP15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 CACNA1EQ15878 2313 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 FAM186AA6NE01 2351 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 KIF1CO43896 1103 aaKnown RBP15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 IMPA1P29218 277 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 OCA2Q04671 838 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 KRT78Q8N1N4 520 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 MAGEL2Q9UJ55 1249 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 FZD4Q9ULV1 537 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 SNX5Q9Y5X3 404 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 C7orf72A4D263 438 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 WASHC1A8K0Z3 465 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 PLOD2O00469 737 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 RB1P06400 928 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 ID2Q02363 134 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 PDCD4Q53EL6 469 aaKnown RBP15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 KIAA1211LQ6NV74 962 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 WASH2PQ6VEQ5 465 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 TMEM26Q6ZUK4 368 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 KLHDC8BQ8IXV7 354 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 TPT1P8Q9HAU6 139 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 RAD18Q9NS91 495 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 SLC6A13Q9NSD5 602 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 FXYD1O00168 92 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 CBSLP0DN79 551 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 CTSEP14091 401 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 TYRP1P17643 537 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 IDSP22304 550 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 CBSP35520 551 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 ILF2Q12905 390 aaKnown RBP15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 WDR48Q8TAF3 677 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 NETO1Q8TDF5 533 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 LCN9Q8WX39 176 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 MPP4Q96JB8 637 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 MRGPRX3Q96LB0 322 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 HAUS8Q9BT25 410 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 SLC2A11Q9BYW1 496 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 POLR1BQ9H9Y6 1135 aa15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 PAPOLBQ9NRJ5 636 aaKnown RBP15.35■□□□□ 0.05
SMARCD1-202ENST00000394963 A0A0J9YVX5 310 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 WSCD2Q2TBF2 565 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 ZDHHC21Q8IVQ6 265 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 UBAP1Q9NZ09 502 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 RUVBL1Q9Y265 456 aaKnown RBP15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 ALPK2Q86TB3 2170 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 CHD5Q8TDI0 1954 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 DDX5P17844 614 aaKnown RBP15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 SNAP47Q5SQN1 464 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 HENMT1Q5T8I9 393 aaKnown RBP15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 FAM83HQ6ZRV2 1179 aaPredicted RBP15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 LPCAT2Q7L5N7 544 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 TBC1D21Q8IYX1 336 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 KCT2Q8NC54 265 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 SLC5A11Q8WWX8 675 aa15.34■□□□□ 0.05
SMARCD1-202ENST00000394963 CREG1O75629 220 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 CYP7B1O75881 506 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 ETHE1O95571 254 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 IL7RP16871 459 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 PFN3P60673 137 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 DPPA4Q7L190 304 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 OLIG3Q7RTU3 272 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 MINDY1Q8N5J2 469 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 FCRL4Q96PJ5 515 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 MCCC1Q96RQ3 725 aaPredicted RBP15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 SCN2AQ99250 2005 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 NOTCH4Q99466 2003 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 TRIT1Q9H3H1 467 aaKnown RBP15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 PIAS3Q9Y6X2 628 aa15.33■□□□□ 0.05
SMARCD1-202ENST00000394963 SGTAO43765 313 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 EEDO75530 441 aaKnown RBP15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 LINGO3P0C6S8 592 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 PRPS2P11908 318 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 FCGR1AP12314 374 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 JUPP14923 745 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 POLR2IP36954 125 aaKnown RBP15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 CSNK1DP48730 415 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 PNLIPRP1P54315 467 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 LRRC32Q14392 662 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 CCDC157Q569K6 752 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 GPR107Q5VW38 600 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 ERMP1Q7Z2K6 904 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 ZNF551Q7Z340 670 aaPredicted RBP15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 MICU2Q8IYU8 434 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 TNIP2Q8NFZ5 429 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 MIPOL1Q8TD10 442 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 PDP1Q9P0J1 537 aaPredicted RBP15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 RIMS3Q9UJD0 308 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 CHD9Q3L8U1 2897 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 PI15O43692 258 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 NUAK1O60285 661 aa15.33■□□□□ 0.04
SMARCD1-202ENST00000394963 ENO2P09104 434 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms