RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 KCNE1BA0A087WTH5 132 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 FOXO6A8MYZ6 492 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 HAT1O14929 419 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 H2AFYO75367 372 aaKnown RBP11.41□□□□□ -0.58
PCNA-201ENST00000379143 SCRG1O75711 98 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 SBK3P0C264 359 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 C1GALT1C1LP0DN25 315 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 ATP5F1P24539 256 aaPredicted RBP11.41□□□□□ -0.58
PCNA-201ENST00000379143 AGTR2P50052 363 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 PCBP4P57723 403 aaKnown RBP11.41□□□□□ -0.58
PCNA-201ENST00000379143 DEFB110Q30KQ9 67 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 FBXO48Q5FWF7 155 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 CATSPEREQ5SY80 951 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 YOD1Q5VVQ6 348 aaPredicted RBP11.41□□□□□ -0.58
PCNA-201ENST00000379143 ATG9BQ674R7 924 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 PWWP2BQ6NUJ5 590 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 FBXO42Q6P3S6 717 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 NXPE4Q6UWF7 544 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 TMPRSS11BQ86T26 416 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 ZNF655Q8N720 491 aaPredicted RBP11.41□□□□□ -0.58
PCNA-201ENST00000379143 BANPQ8N9N5 519 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 MDM1Q8TC05 714 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 ZCCHC14Q8WYQ9 949 aaKnown RBP11.41□□□□□ -0.58
PCNA-201ENST00000379143 ESAMQ96AP7 390 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 PHF21BQ96EK2 531 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 ZNF285Q96NJ3 590 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 AIF1LQ9BQI0 150 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 NLNQ9BYT8 704 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 SLC7A5P2Q9GIP4 190 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 SSU72Q9NP77 194 aaKnown RBP11.41□□□□□ -0.58
PCNA-201ENST00000379143 IRAK4Q9NWZ3 460 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 FOXJ2Q9P0K8 574 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 SRPK3Q9UPE1 567 aa11.41□□□□□ -0.58
PCNA-201ENST00000379143 TMEM184BQ9Y519 407 aaPredicted RBP11.41□□□□□ -0.58
PCNA-201ENST00000379143 SNRNP200O75643 2136 aaKnown RBP11.41□□□□□ -0.58
PCNA-201ENST00000379143 A0A0J9YVX5 310 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 TRBC2A0A5B9 178 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 A8MT66 165 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 H3BMH7 237 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 E2F3O00716 465 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 ZSCAN9O15535 394 aaPredicted RBP11.4□□□□□ -0.58
PCNA-201ENST00000379143 PLIN3O60664 434 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 CPNE3O75131 537 aaKnown RBP11.4□□□□□ -0.58
PCNA-201ENST00000379143 STK17BO94768 372 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 PROCP04070 461 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 MYL2P10916 166 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 LIPCP11150 499 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 GSTM2P28161 218 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 CASP2P42575 452 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 ARSFP54793 590 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 EMP3P54852 163 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 VSX2P58304 361 aaPredicted RBP11.4□□□□□ -0.58
PCNA-201ENST00000379143 NAA20P61599 178 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 HERVK_113P63132 956 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 PCDH1Q08174 1060 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 LAPTM5Q13571 262 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 MAP7Q14244 749 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 GRM7Q14831 915 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 TBCCQ15814 346 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 HIST2H2ACQ16777 129 aaPredicted RBP11.4□□□□□ -0.58
PCNA-201ENST00000379143 FAM214AQ32MH5 1076 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 TNFAIP8L3Q5GJ75 292 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 PAGE2BQ5JRK9 111 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 HIST2H2AA3Q6FI13 130 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 FRMPD2BQ6IN97 320 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 C16orf46Q6P387 395 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 SLCO4C1Q6ZQN7 724 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 KRT78Q8N1N4 520 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 TEX9Q8N6V9 391 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 CCDC63Q8NA47 563 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 TTC29Q8NA56 475 aaPredicted RBP11.4□□□□□ -0.58
PCNA-201ENST00000379143 ZNF248Q8NDW4 579 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 SNIP1Q8TAD8 396 aaKnown RBP11.4□□□□□ -0.58
PCNA-201ENST00000379143 PMEPA1Q969W9 287 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 WDR34Q96EX3 536 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 PTCD3Q96EY7 689 aaKnown RBP11.4□□□□□ -0.58
PCNA-201ENST00000379143 SEC16BQ96JE7 1060 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 LRFN5Q96NI6 719 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 OR2A5Q96R48 311 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 NDC1Q9BTX1 674 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 EFCAB11Q9BUY7 163 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 C1QTNF3Q9BXJ4 246 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 ERVK-6Q9BXR3 956 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 VIPAS39Q9H9C1 493 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 ACTR5Q9H9F9 607 aaPredicted RBP11.4□□□□□ -0.58
PCNA-201ENST00000379143 EMCNQ9ULC0 261 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 SH2B3Q9UQQ2 575 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 PLLPQ9Y342 182 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 CELSR3Q9NYQ7 3312 aa11.4□□□□□ -0.58
PCNA-201ENST00000379143 FITM1A5D6W6 292 aa11.39□□□□□ -0.59
PCNA-201ENST00000379143 H0YGG7 62 aa11.39□□□□□ -0.59
PCNA-201ENST00000379143 TAF4O00268 1085 aa11.39□□□□□ -0.59
PCNA-201ENST00000379143 ZNF749O43361 778 aa11.39□□□□□ -0.59
PCNA-201ENST00000379143 HCRTR1O43613 425 aa11.39□□□□□ -0.59
PCNA-201ENST00000379143 NRP2O60462 931 aa11.39□□□□□ -0.59
PCNA-201ENST00000379143 DLX3O60479 287 aa11.39□□□□□ -0.59
PCNA-201ENST00000379143 UGDHO60701 494 aa11.39□□□□□ -0.59
PCNA-201ENST00000379143 KIAA0754O94854 1291 aa11.39□□□□□ -0.59
PCNA-201ENST00000379143 SIX3O95343 332 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms