RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 RABIFP47224 123 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 CDKN1CP49918 316 aaPredicted RBP20.54■□□□□ 0.88
SKI-201ENST00000378536 ABATP80404 500 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 KRR1Q13601 381 aaKnown RBP20.54■□□□□ 0.88
SKI-201ENST00000378536 MBTPS1Q14703 1052 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 ARHGAP40Q5TG30 622 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 NEK5Q6P3R8 708 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 AQP12AQ8IXF9 295 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 MTERF3Q96E29 417 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 LYARQ9NX58 379 aaKnown RBP20.54■□□□□ 0.88
SKI-201ENST00000378536 LOC100506127A0A0U1RQW1 187 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 OR6C74A6NCV1 312 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 CAPN5O15484 640 aaPredicted RBP20.54■□□□□ 0.88
SKI-201ENST00000378536 SPANXN4Q5MJ08 99 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 TICAM1Q8IUC6 712 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 C17orf62Q9BQA9 187 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 ZNF576Q9H609 170 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 SMIM31A0A1B0GVY4 71 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 IRGMA1A4Y4 181 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 GGT5P36269 586 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 CSNK2BP67870 215 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 C6orf136Q5SQH8 315 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 UNC5DQ6UXZ4 953 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 VN1R2Q8NFZ6 395 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 NELL2Q99435 816 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 OSBPL10Q9BXB5 764 aa20.54■□□□□ 0.88
SKI-201ENST00000378536 TRIM43BA6NCK2 446 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 STX11O75558 287 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 GADD45GO95257 159 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 HNRNPA2B1P22626 353 aaKnown RBP20.53■□□□□ 0.88
SKI-201ENST00000378536 CTGFP29279 349 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 ARRDC2Q8TBH0 407 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 TRIM43Q96BQ3 446 aaPredicted RBP20.53■□□□□ 0.88
SKI-201ENST00000378536 SERHL2Q9H4I8 314 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 FBRSL1Q9HCM7 1045 aaKnown RBP20.53■□□□□ 0.88
SKI-201ENST00000378536 SERHLQ9NQF3 203 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 WBP1LQ9NX94 342 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 DLGAP3O95886 979 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 PDYNP01213 254 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 NRG3P56975 720 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 TRIM16LQ309B1 348 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 NPAS3Q8IXF0 933 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 GPATCH1Q9BRR8 931 aaKnown RBP20.53■□□□□ 0.88
SKI-201ENST00000378536 SLC39A3Q9BRY0 314 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 RAB26Q9ULW5 256 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 DLGAP4Q9Y2H0 992 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 A8MUA0 341 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 LDB2O43679 373 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 COQ9O75208 318 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 CDK9P50750 372 aaKnown RBP20.53■□□□□ 0.88
SKI-201ENST00000378536 NFE2L1Q14494 772 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 JAZF1Q86VZ6 243 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 PIGKQ92643 395 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 IL17FQ96PD4 163 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 SLC7A8Q9UHI5 535 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 ATP5A1P25705 553 aaKnown RBP20.53■□□□□ 0.88
SKI-201ENST00000378536 AMIGO1Q86WK6 493 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 OR8H2Q8N162 312 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 GPR26Q8NDV2 337 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 PRRG4Q9BZD6 226 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 RMI1Q9H9A7 625 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 NECTIN3Q9NQS3 549 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 TOR4AQ9NXH8 423 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 CAB39Q9Y376 341 aaPredicted RBP20.53■□□□□ 0.88
SKI-201ENST00000378536 ADAMTSL1Q8N6G6 1762 aa20.53■□□□□ 0.88
SKI-201ENST00000378536 SOBPA7XYQ1 873 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 KIF1CO43896 1103 aaKnown RBP20.52■□□□□ 0.88
SKI-201ENST00000378536 NME6O75414 186 aaPredicted RBP20.52■□□□□ 0.88
SKI-201ENST00000378536 SNAPC1Q16533 368 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 PARS2Q7L3T8 475 aaKnown RBP20.52■□□□□ 0.88
SKI-201ENST00000378536 DNAJB9Q9UBS3 223 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 A0A0U1RQS6 177 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 JUPP14923 745 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 ZNF140P52738 457 aaPredicted RBP20.52■□□□□ 0.88
SKI-201ENST00000378536 DPY19L2P1Q6NXN4 242 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 C1orf21Q9H246 121 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 HCN3Q9P1Z3 774 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 CCL26Q9Y258 94 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 PRSS51A0A1B0GVH4 220 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 NELFEP18615 380 aaKnown RBP20.52■□□□□ 0.88
SKI-201ENST00000378536 DUSP3P51452 185 aaPredicted RBP20.52■□□□□ 0.88
SKI-201ENST00000378536 GRIN2CQ14957 1233 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 TRIM71Q2Q1W2 868 aaKnown RBP20.52■□□□□ 0.88
SKI-201ENST00000378536 ZNF542PQ5EBM4 170 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 GPR65Q8IYL9 337 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 CHCHD4Q8N4Q1 142 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 FAM81AQ8TBF8 368 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 PMEPA1Q969W9 287 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 SLC22A12Q96S37 553 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 ARPC2O15144 300 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 PGM3O95394 542 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 CCKBRP32239 447 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 GJA4P35212 333 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 MRPS15P82914 257 aaKnown RBP20.52■□□□□ 0.88
SKI-201ENST00000378536 NIPAL1Q6NVV3 410 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 HSD11B1LQ7Z5J1 315 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 THAP5Q7Z6K1 395 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 MFSD6LQ8IWD5 586 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 ARNT2Q9HBZ2 717 aa20.52■□□□□ 0.88
SKI-201ENST00000378536 ERVK-11Q9UQG0 969 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms