RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 GDPD4Q6W3E5 623 aa17.59■□□□□ 0.41
TDP2-202ENST00000378198 HS6ST3Q8IZP7 471 aa17.59■□□□□ 0.41
TDP2-202ENST00000378198 CLECL1Q8IZS7 167 aa17.59■□□□□ 0.41
TDP2-202ENST00000378198 ZNF540Q8NDQ6 660 aa17.59■□□□□ 0.41
TDP2-202ENST00000378198 ATL1Q8WXF7 558 aa17.59■□□□□ 0.41
TDP2-202ENST00000378198 CLP1Q92989 425 aaKnown RBP17.59■□□□□ 0.41
TDP2-202ENST00000378198 FAM83DQ9H4H8 585 aa17.59■□□□□ 0.41
TDP2-202ENST00000378198 BRF2Q9HAW0 419 aa17.59■□□□□ 0.41
TDP2-202ENST00000378198 SPG21Q9NZD8 308 aa17.59■□□□□ 0.41
TDP2-202ENST00000378198 BTNL2Q9UIR0 455 aa17.59■□□□□ 0.41
TDP2-202ENST00000378198 MYOFQ9NZM1 2061 aa17.58■□□□□ 0.41
TDP2-202ENST00000378198 KRT87PA6NCN2 255 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 H0YIV9 168 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 SCAMP2O15127 329 aaKnown RBP17.58■□□□□ 0.4
TDP2-202ENST00000378198 TEX28O15482 410 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 FAM20BO75063 409 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 MTX2O75431 263 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 FSHRP23945 695 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 MAP2K4P45985 399 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 ASMTP46597 345 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 DOC2AQ14183 400 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 CLCA4Q14CN2 919 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 DGUOKQ16854 277 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 LRRC73Q5JTD7 316 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 GRHL2Q6ISB3 625 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 FAHD1Q6P587 224 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 GALNT10Q86SR1 603 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 P2RY8Q86VZ1 359 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 ATG16L2Q8NAA4 619 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 VPS37AQ8NEZ2 397 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 IPCEF1Q8WWN9 437 aaPredicted RBP17.58■□□□□ 0.4
TDP2-202ENST00000378198 PITX2Q99697 317 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 DPH2Q9BQC3 489 aaPredicted RBP17.58■□□□□ 0.4
TDP2-202ENST00000378198 PCDH12Q9NPG4 1184 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 THUMPD1Q9NXG2 353 aaKnown RBP17.58■□□□□ 0.4
TDP2-202ENST00000378198 ERVK-11Q9UQG0 969 aa17.58■□□□□ 0.4
TDP2-202ENST00000378198 QSOX1O00391 747 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 KPNA4O00629 521 aaPredicted RBP17.57■□□□□ 0.4
TDP2-202ENST00000378198 SGTAO43765 313 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 PSIP1O75475 530 aaKnown RBP17.57■□□□□ 0.4
TDP2-202ENST00000378198 C9P02748 559 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 MT-ND2P03891 347 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 FUCA1P04066 466 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 LAMP1P11279 417 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 PORP16435 677 aaPredicted RBP17.57■□□□□ 0.4
TDP2-202ENST00000378198 IDUAP35475 653 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 RXRGP48443 463 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 SERPINB10P48595 397 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 ST13P50502 369 aaKnown RBP17.57■□□□□ 0.4
TDP2-202ENST00000378198 DCDC1P59894 354 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 CSNK2BP67870 215 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 EGFLAMQ63HQ2 1017 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 PDE12Q6L8Q7 609 aaKnown RBP17.57■□□□□ 0.4
TDP2-202ENST00000378198 TMC8Q8IU68 726 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 KLHDC8AQ8IYD2 350 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 CDC26Q8NHZ8 85 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 TIFAQ96CG3 184 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 C11orf24Q96F05 449 aaPredicted RBP17.57■□□□□ 0.4
TDP2-202ENST00000378198 MTERF1Q99551 399 aaKnown RBP17.57■□□□□ 0.4
TDP2-202ENST00000378198 EPYCQ99645 322 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 AKIP1Q9NQ31 210 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.57■□□□□ 0.4
TDP2-202ENST00000378198 AASSQ9UDR5 926 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 FZD4Q9ULV1 537 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 UPK3BL1B0FP48 263 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 UPK3BL2E5RIL1 263 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 E7EQ34 232 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 AXIN1O15169 862 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 YY2O15391 372 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 MAN1A2O60476 641 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 VIPR1P32241 457 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 MASP1P48740 699 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 RELAQ04206 551 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 PCDH1Q08174 1060 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 NPRL3Q12980 569 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 DDX39BQ13838 428 aaKnown RBP17.57■□□□□ 0.4
TDP2-202ENST00000378198 PROX2Q3B8N5 592 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 ADPRMQ3LIE5 342 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 CPTPQ5TA50 214 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 ANXA8L1Q5VT79 327 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 CCDC81Q6ZN84 652 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 PRSS48Q7RTY5 328 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 CAMKMTQ7Z624 323 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 CHST14Q8NCH0 376 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 SH3KBP1Q96B97 665 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 ZNF689Q96CS4 500 aaPredicted RBP17.57■□□□□ 0.4
TDP2-202ENST00000378198 CHST8Q9H2A9 424 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 ACOT13Q9NPJ3 140 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 ADPRHL2Q9NX46 363 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 SLCO3A1Q9UIG8 710 aa17.57■□□□□ 0.4
TDP2-202ENST00000378198 ARHGEF33A8MVX0 844 aa17.56■□□□□ 0.4
TDP2-202ENST00000378198 LRG1P02750 347 aa17.56■□□□□ 0.4
TDP2-202ENST00000378198 LAG3P18627 525 aa17.56■□□□□ 0.4
TDP2-202ENST00000378198 EFNA1P20827 205 aaPredicted RBP17.56■□□□□ 0.4
TDP2-202ENST00000378198 IQCCQ4KMZ1 466 aa17.56■□□□□ 0.4
TDP2-202ENST00000378198 BRAT1Q6PJG6 821 aa17.56■□□□□ 0.4
TDP2-202ENST00000378198 AGTRAPQ6RW13 159 aa17.56■□□□□ 0.4
TDP2-202ENST00000378198 Q6ZVU0 165 aa17.56■□□□□ 0.4
TDP2-202ENST00000378198 GLMNQ92990 594 aa17.56■□□□□ 0.4
TDP2-202ENST00000378198 SCAMP4Q969E2 229 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms