RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SBSNQ6UWP8 590 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 DTWD1Q8N5C7 304 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 OR56A3Q8NH54 315 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 MIEF2Q96C03 454 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 FBXL8Q96CD0 374 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 CPNE1Q99829 537 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 DRC3Q9H069 523 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 SYNPO2LQ9H987 977 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 TCRBV9S1A1TA0A576 114 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 P2RX6O15547 441 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 DPM1O60762 260 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 GUCA1CO95843 209 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 ALPPP05187 535 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 CDH1P12830 882 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 TAS2R39P59534 338 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 POU4F1Q01851 419 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 KCNC4Q03721 635 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 FAM53BQ14153 422 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 ZNF460Q14592 562 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 RBBP7Q16576 425 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 WHAMMP3Q1A5X7 153 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 VWA5B1Q5TIE3 1220 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 SHISA6Q6ZSJ9 500 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 CYS1Q717R9 158 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 ADAMTSL2Q86TH1 951 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 CCDC25Q86WR0 208 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 PLD3Q8IV08 490 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 GALNT16Q8N428 558 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 FBXO25Q8TCJ0 367 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 STT3BQ8TCJ2 826 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 TSPAN17Q96FV3 270 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 MCMBPQ9BTE3 642 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 CRB3Q9BUF7 120 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 NUDT9Q9BW91 350 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 FAM129AQ9BZQ8 928 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 GPAMQ9HCL2 828 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 SMYD2Q9NRG4 433 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 C14orf105Q9NVL8 296 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 SH2B3Q9UQQ2 575 aa16.01■□□□□ 0.15
HMGN4-201ENST00000377575 IGLV3-12A0A075B6K2 115 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 KCNE1BA0A087WTH5 132 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 NPEPPSL1A6NEC2 478 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 URI1O94763 535 aaPredicted RBP16■□□□□ 0.15
HMGN4-201ENST00000377575 ZGLP1P0C6A0 271 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 STX2P32856 288 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 AVPR1BP47901 424 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 CCR8P51685 355 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 CSNK1G2P78368 415 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 KLC1Q07866 573 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 AIMP2Q13155 320 aaKnown RBP16■□□□□ 0.15
HMGN4-201ENST00000377575 PPP1R3AQ16821 1122 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 TUBB8Q3ZCM7 444 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 TMEM207Q6UWW9 146 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 C3orf62Q6ZUJ4 267 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 FRA10AC1Q70Z53 315 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 ARHGEF39Q8N4T4 335 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 TBC1D19Q8N5T2 526 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 CAMKVQ8NCB2 501 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 PYCR2Q96C36 320 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 MMABQ96EY8 250 aaPredicted RBP16■□□□□ 0.15
HMGN4-201ENST00000377575 RBBP8Q99708 897 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 SMAD5Q99717 465 aaKnown RBP16■□□□□ 0.15
HMGN4-201ENST00000377575 YIPF2Q9BWQ6 316 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 CLMPQ9H6B4 373 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 MKKSQ9NPJ1 570 aaPredicted RBP16■□□□□ 0.15
HMGN4-201ENST00000377575 ATP13A2Q9NQ11 1180 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 C5AR2Q9P296 337 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 TRPC4Q9UBN4 977 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 FBXL4Q9UKA2 621 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 MAP4K5Q9Y4K4 846 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 HS3ST3B1Q9Y662 390 aa16■□□□□ 0.15
HMGN4-201ENST00000377575 FAM159BA6NKW6 160 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 SOCS6O14544 535 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 IPO13O94829 963 aaKnown RBP15.99■□□□□ 0.15
HMGN4-201ENST00000377575 SLC35G6P0C7Q6 338 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 NPPBP16860 134 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 GP5P40197 560 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 SLC26A3P40879 764 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 CDKL1Q00532 357 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 RAPSNQ13702 412 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 MYBPC3Q14896 1274 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 VN1R4Q7Z5H5 301 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 CEP97Q8IW35 865 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 CTAGE3PQ8IX95 158 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 ABHD11Q8NFV4 315 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 EGFL8Q99944 293 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 CTNNAL1Q9UBT7 734 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 C3orf18Q9UK00 162 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 IKZF3Q9UKT9 509 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 OARD1Q9Y530 152 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 MYO18BQ8IUG5 2567 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 DOCK10Q96BY6 2186 aa15.99■□□□□ 0.15
HMGN4-201ENST00000377575 UBR5O95071 2799 aaPredicted RBP15.98■□□□□ 0.15
HMGN4-201ENST00000377575 A0A0A6YYC8 382 aaPredicted RBP15.98■□□□□ 0.15
HMGN4-201ENST00000377575 FEZF1A0PJY2 475 aa15.98■□□□□ 0.15
HMGN4-201ENST00000377575 CXorf49A8MYA2 514 aaPredicted RBP15.98■□□□□ 0.15
HMGN4-201ENST00000377575 I3L1I5 382 aaPredicted RBP15.98■□□□□ 0.15
HMGN4-201ENST00000377575 CDC7O00311 574 aa15.98■□□□□ 0.15
HMGN4-201ENST00000377575 MAP2K7O14733 419 aa15.98■□□□□ 0.15
HMGN4-201ENST00000377575 PIAS1O75925 651 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms