RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 HERVK_113P63132 956 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 VEPH1Q14D04 833 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 TBCEQ15813 527 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-203ENST00000375315 FBXO43Q4G163 708 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 MS4A13Q5J8X5 152 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 PKN3Q6P5Z2 889 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 TMEM65Q6PI78 240 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 PDZD4Q76G19 769 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-203ENST00000375315 TMEM179BQ7Z7N9 219 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 RDH10Q8IZV5 341 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 FAM162AQ96A26 154 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 ISG20Q96AZ6 181 aaKnown RBP11.79□□□□□ -0.52
C9orf3-203ENST00000375315 MLPHQ9BV36 600 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-203ENST00000375315 ERVK-6Q9BXR3 956 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 TNKS2Q9H2K2 1166 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 C3orf14Q9HBI5 128 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 TRPM5Q9NZQ8 1165 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 BTRCQ9Y297 605 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 SNX8Q9Y5X2 465 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 U3KQV3 271 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 A0A075B6Q4 140 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 KIAA0355O15063 1070 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 BNIP3LO60238 219 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 ERN1O75460 977 aaKnown RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 SLC22A5O76082 557 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 CDK14O94921 469 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 LAG3P18627 525 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 DDCP20711 480 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 CD72P21854 359 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 GABRR2P28476 465 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 IRS1P35568 1242 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 SLC1A2P43004 574 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 GBX1Q14549 363 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 TAB1Q15750 504 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 NKG7Q16617 165 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 PCID2Q5JVF3 399 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 C9orf50Q5SZB4 431 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 ZBTB37Q5TC79 503 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 SLC8B1Q6J4K2 584 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 LURAP1LQ8IV03 231 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 LINC00469Q8N7U9 141 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 IPMKQ8NFU5 416 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 TEX37Q96LM6 180 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 PPM1MQ96MI6 270 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 CCDC115Q96NT0 180 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 COPS4Q9BT78 406 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 OR51E2Q9H255 320 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 PPA2Q9H2U2 334 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 ASAH2Q9NR71 780 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 ZNF224Q9NZL3 707 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 FNDC3AQ9Y2H6 1198 aaKnown RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 A0A1W2PQ09 198 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 A0A1W2PRU2 124 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 FAM234BA2RU67 622 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 GRXCR2A6NFK2 248 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 TGM5O43548 720 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 NDUFA2O43678 99 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 TNFRSF21O75509 655 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 PFKLP17858 780 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 OR1E1P30953 314 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 MRPL19P49406 292 aaKnown RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 ARHGDIAP52565 204 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 UFM1P61960 85 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 PROX2Q3B8N5 592 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 SETMARQ53H47 684 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 PRSS36Q5K4E3 855 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 TMEM240Q5SV17 173 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 KANK2Q63ZY3 851 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 TPGS1Q6ZTW0 290 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 TSPYL5Q86VY4 417 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 P3H2Q8IVL5 708 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 SPNS2Q8IVW8 549 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 FNDC5Q8NAU1 212 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 TTLQ8NG68 377 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 OR2T12Q8NG77 320 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 NTAN1Q96AB6 310 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 ZNF689Q96CS4 500 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 ZNF578Q96N58 590 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 SPATA9Q9BWV2 254 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 ALG9Q9H6U8 611 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 ZNF334Q9HCZ1 680 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 WASH6PQ9NQA3 447 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 AFF4Q9UHB7 1163 aaKnown RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 EVLQ9UI08 416 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 AGO1Q9UL18 857 aaKnown RBP11.78□□□□□ -0.52
C9orf3-203ENST00000375315 MICAL3Q7RTP6 2002 aa11.78□□□□□ -0.52
C9orf3-203ENST00000375315 A8MUA0 341 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 B4DXG7 233 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 NRG2O14511 850 aaPredicted RBP11.77□□□□□ -0.52
C9orf3-203ENST00000375315 ANKRD28O15084 1053 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 TSC22D2O75157 780 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 PAMP19021 973 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 ACVRL1P37023 503 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 ASAH1Q13510 395 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 IRF3Q14653 427 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 ANGPT1Q15389 498 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 ATP6AP1LQ52LC2 224 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 IL31Q6EBC2 164 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 TMPRSS11AQ6ZMR5 421 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 CDYL2Q8N8U2 506 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms