RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 AQP12AQ8IXF9 295 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 FAM156AQ8NDB6 213 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 CRELD1Q96HD1 420 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 FLRT1Q9NZU1 646 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 BACE2Q9Y5Z0 518 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 TCRBV21S2A2A0A5A6 115 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 PIP5K1BO14986 540 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 RBBP4Q09028 425 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 NFATC2Q13469 925 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 CHRNA6Q15825 494 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 RNASE12Q5GAN4 147 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 DCST1Q5T197 706 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 FAM171BQ6P995 826 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 RASGRP3Q8IV61 690 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 SETD7Q8WTS6 366 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLCO2A1Q92959 643 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 FEM1AQ9BSK4 669 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 NSUN3Q9H649 340 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 COQ3Q9NZJ6 369 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 MAN2B1O00754 1011 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 CCNB2O95067 398 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 MNDAP41218 407 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC13A2Q13183 592 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 FGL2Q14314 439 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 FBXO48Q5FWF7 155 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 GOLM1Q8NBJ4 401 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 C11orf65Q8NCR3 313 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 KAT2AQ92830 837 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 TOP1MTQ969P6 601 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 DPYSL5Q9BPU6 564 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 KCNS3Q9BQ31 491 aa12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 MRPL22Q9NWU5 206 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 EIF2B4Q9UI10 523 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-201ENST00000372189 COL16A1Q07092 1604 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 CCDC88AQ3V6T2 1871 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 ATP1B2P14415 290 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 GNAZP19086 355 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 CD40LGP29965 261 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 GALNT1Q10472 559 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 PHF19Q5T6S3 580 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 CXorf57Q6NSI4 855 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 DGLUCYQ7Z3D6 616 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 SPATA6Q9NWH7 488 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 TRPM3Q9HCF6 1732 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 IGKV6D-21A0A0A0MT36 114 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 EFCAB9A8MZ26 197 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 UBXN7O94888 489 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 CCR10P46092 362 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 ARFIP1P53367 373 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 SOX4Q06945 474 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF460Q14592 562 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 ASTE1Q2TB18 679 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 FSTL5Q8N475 847 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 DNASE1L2Q92874 299 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 MIPEPQ99797 713 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 EBF4Q9BQW3 602 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 MOB1AQ9H8S9 216 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 TAS2R7Q9NYW3 318 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 NKX1-2Q9UD57 310 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 BAZ2AQ9UIF9 1905 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 RGPD1P0DJD0 1748 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 PRKD3O94806 890 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 DLDP09622 509 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 AGXTP21549 392 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 RAB7AP51149 207 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 CCR8P51685 355 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 GSCP56915 257 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 LARS2Q15031 903 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC9B1Q4ZJI4 515 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 ALKBH2Q6NS38 261 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 TMEM214Q6NUQ4 689 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 TTLQ8NG68 377 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 DNAJB8Q8NHS0 232 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 SMARCD2Q92925 531 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 ASB9Q96DX5 294 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 NSMCE3Q96MG7 304 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 NPY6RQ99463 290 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 NAV1Q8NEY1 1877 aa12.96□□□□□ -0.33
RAPGEF1-201ENST00000372189 HEPACAM2A8MVW5 462 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 H7C1Q1 480 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 CLDN7O95471 211 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 AZGP1P25311 298 aaKnown RBP12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 HOXD13P35453 343 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 OR2B6P58173 313 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 ALG1LQ6GMV1 187 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 PRSS58Q8IYP2 241 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF317Q96PQ6 595 aaPredicted RBP12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 GAL3ST4Q96RP7 486 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 GLS2Q9UI32 602 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 GJB5O95377 273 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF8P17098 575 aaPredicted RBP12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 CPN2P22792 545 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 PAFAH1B3Q15102 231 aaKnown RBP12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 TPRG1Q6ZUI0 275 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZDHHC21Q8IVQ6 265 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 PLEKHO2Q8TD55 490 aa12.96□□□□□ -0.34
RAPGEF1-201ENST00000372189 CLCA1A8K7I4 914 aa12.95□□□□□ -0.34
RAPGEF1-201ENST00000372189 J3QR89 54 aa12.95□□□□□ -0.34
RAPGEF1-201ENST00000372189 PRAMEF11O60813 436 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms