RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PADI4Q9UM07 663 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 FADS3Q9Y5Q0 445 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 LNP1A1A4G5 178 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 NEMP2A6NFY4 417 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 UBXN8O00124 270 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 ACOT7O00154 380 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 RRP8O43159 456 aaKnown RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 KLK8O60259 260 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 APBB3O95704 486 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 GM2AP17900 193 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 DRD3P35462 400 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 RPL14P50914 215 aaKnown RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 ALDH18A1P54886 795 aaKnown RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 MRPS21P82921 87 aaKnown RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 CNTN1Q12860 1018 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 PMS2P11Q13670 270 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 USP39Q53GS9 565 aaKnown RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 PIP5KL1Q5T9C9 394 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 SEL1L3Q68CR1 1132 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 THAP5Q7Z6K1 395 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 GPSM1Q86YR5 675 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 FITM2Q8N6M3 262 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 ZNF781Q8N8C0 355 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 EXT2Q93063 718 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 SCARF2Q96GP6 870 aaPredicted RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 FAR2Q96K12 515 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 NUDT4Q9NZJ9 180 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 ZFP69BQ9UJL9 534 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 SCML1Q9UN30 329 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 A0A1B0GVC2 190 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 FADS2P1A8MWK0 482 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 CDC7O00311 574 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 CDX4O14627 284 aaPredicted RBP8.5□□□□□ -1.05
TPM3-213ENST00000368545 MID1O15344 667 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 SNX2O60749 519 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 CCDC22O60826 627 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 RECQL5O94762 991 aaPredicted RBP8.5□□□□□ -1.05
TPM3-213ENST00000368545 CHRNGP07510 517 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 WASP42768 502 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 KCNC1P48547 511 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 ZBTB16Q05516 673 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 PON2Q15165 354 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 PFKFB4Q16877 469 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 PLEKHS1Q5SXH7 462 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 AGBL4Q5VU57 503 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 PMS2CLQ68D20 193 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 SLC23A3Q6PIS1 610 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 PTGR2Q8N8N7 351 aaPredicted RBP8.5□□□□□ -1.05
TPM3-213ENST00000368545 ZNF527Q8NB42 609 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 HIPK4Q8NE63 616 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 OR14C36Q8NHC7 312 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 LKAAEAR1Q8TD35 194 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 C1QTNF3Q9BXJ4 246 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 GSTO2Q9H4Y5 243 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 ZDHHC4Q9NPG8 344 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 MYOTQ9UBF9 498 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 HEY2Q9UBP5 337 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 SLC12A4Q9UP95 1085 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 LRRC14BA6NHZ5 514 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 B8ZZF3 427 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 MATN2O00339 956 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 RAD51BO15315 384 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 HDAC3O15379 428 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 FRS3O43559 492 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 ATP5HO75947 161 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 SUPT7LO94864 414 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 PCDH8O95206 1070 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 GP1BBP13224 206 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 HOXB2P14652 356 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 ITGB6P18564 788 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 AOAHP28039 575 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 PRLHRP49683 370 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 COPAP53621 1224 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 TGFBIQ15582 683 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 TBCCQ15814 346 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 GALNTL6Q49A17 601 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 FAM91A1Q658Y4 838 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 RAET1GQ6H3X3 334 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 TMPRSS7Q7RTY8 843 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 KANSL1Q7Z3B3 1105 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 CLNKQ7Z7G1 428 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 LSMEM2Q8N112 164 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 AADATQ8N5Z0 425 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 RNF152Q8N8N0 203 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 IL17RCQ8NAC3 791 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 NAXEQ8NCW5 288 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 OR2I1PQ8NGU4 316 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 FAM131CQ96AQ9 280 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 TMEM41AQ96HV5 264 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 RILPQ96NA2 401 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 TUBB6Q9BUF5 446 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 TXLNGQ9NUQ3 528 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 PNPOQ9NVS9 261 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 ASH2LQ9UBL3 628 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 OARD1Q9Y530 152 aa8.5□□□□□ -1.05
TPM3-213ENST00000368545 ANKRD12Q6UB98 2062 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 TRPM6Q9BX84 2022 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 TRPC5OSA6NMA1 111 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 HGSO14964 777 aaPredicted RBP8.49□□□□□ -1.05
TPM3-213ENST00000368545 NUAK1O60285 661 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms