RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 RAB11FIP5Q9BXF6 653 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 ANKRD2Q9GZV1 360 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 HOXD1Q9GZZ0 328 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 ANKEF1Q9NU02 776 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 BCCIPQ9P287 314 aaKnown RBP eCLIP3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 THAP10Q9P2Z0 257 aaPredicted RBP3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 PRDM4Q9UKN5 801 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 IGSF1Q8N6C5 1336 aa3.7□□□□□ -1.82
RNU4-28P-201ENST00000364739 G3V2L1 256 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 O00370 1275 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 IGHV3-13P01766 116 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 IL11P20809 199 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 HOXC13P31276 330 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 CYB5D1Q6P9G0 228 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 RBPMS2Q6ZRY4 209 aaKnown RBP3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 SLC24A5Q71RS6 500 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 OR6J1Q8NGC5 347 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 OR2L2Q8NH16 312 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 C9orf43Q8TAL5 461 aaPredicted RBP3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 TSACCQ96A04 125 aaPredicted RBP3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 SPSB1Q96BD6 273 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 PDLIM5Q96HC4 596 aaKnown RBP3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 FOXN4Q96NZ1 517 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 CDCA3Q99618 268 aaPredicted RBP3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 OVOL2Q9BRP0 275 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 ZNF577Q9BSK1 485 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 FAM129AQ9BZQ8 928 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 CCDC177Q9NQR7 707 aaPredicted RBP3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 NDE1Q9NXR1 346 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 BAIAP2L1Q9UHR4 511 aa3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 PA2G4Q9UQ80 394 aaKnown RBP3.69□□□□□ -1.82
RNU4-28P-201ENST00000364739 HCFC1P51610 2035 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 ADAMTS9Q9P2N4 1935 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 ZNF318Q5VUA4 2279 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 TRAV24A0A0B4J272 114 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 MTMR11A4FU01 709 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 A8MXK9 166 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 SRRM5B3KS81 715 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 RTCAO00442 366 aaKnown RBP3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 P4HA2O15460 535 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 ECE2O60344 883 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 SRSF10O75494 262 aaKnown RBP3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 THEGLP0DJG4 465 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 F3P13726 295 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 RAD52P43351 418 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 CLCN4P51793 760 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 LIMK1P53667 647 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 IRX4P78413 519 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 DHODHQ02127 395 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 SGCGQ13326 291 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 NOTUMQ6P988 496 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 FCRLAQ7L513 359 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 CDC20BQ86Y33 519 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 FAM89BQ8N5H3 189 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 TCEANCQ8N8B7 351 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 PI4KAP1Q8N8J0 262 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 TDRD5Q8NAT2 981 aaKnown RBP3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 XXYLT1Q8NBI6 393 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 HDAC11Q96DB2 347 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 SLC45A3Q96JT2 553 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 NEDD4LQ96PU5 975 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 TRIM6Q9C030 488 aaPredicted RBP3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 RIMS4Q9H426 269 aaPredicted RBP3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 GNB4Q9HAV0 340 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 ZNF510Q9Y2H8 683 aa3.68□□□□□ -1.82
RNU4-28P-201ENST00000364739 LOC105371242A0A075B767 164 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 C2CD4DB7Z1M9 353 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 MYBL1P10243 752 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 OXTRP30559 389 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 DUTP33316 252 aaKnown RBP3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 CETN2P41208 172 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 RAB28P51157 221 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 DCDC1P59894 354 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 ILF2Q12905 390 aaKnown RBP3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 PIGWQ7Z7B1 504 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 FAM219AQ8IW50 185 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 RCOR2Q8IZ40 523 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 ABHD12Q8N2K0 398 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 RYBPQ8N488 228 aaPredicted RBP3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 LRRC15Q8TF66 581 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 DNAI2Q9GZS0 605 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 FZD8Q9H461 694 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 ST6GALNAC4Q9H4F1 302 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 PANK3Q9H999 370 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 RAVER2Q9HCJ3 691 aaKnown RBP3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 XAB2Q9HCS7 855 aaKnown RBP3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 HACD3Q9P035 362 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 C5AR2Q9P296 337 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 WIPI2Q9Y4P8 454 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 GON4LQ3T8J9 2241 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 SPATA31D1Q6ZQQ2 1576 aa3.67□□□□□ -1.82
RNU4-28P-201ENST00000364739 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 TFECO14948 347 aaPredicted RBP3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 CEACAM4O75871 244 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 POP4O95707 220 aaKnown RBP3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 STAG3L1P0CL83 205 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 TCF4P15884 667 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 EEF1B2P24534 225 aaKnown RBP3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 NOVP48745 357 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms