RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 GRAMD1AQ96CP6 724 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 TCTN2Q96GX1 697 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 SLC41A2Q96JW4 573 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 MAGEB10Q96LZ2 347 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 CDK15Q96Q40 435 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 AIF1LQ9BQI0 150 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 EFCAB11Q9BUY7 163 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 PITHD1Q9GZP4 211 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 KLHL25Q9H0H3 589 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 ZNF768Q9H5H4 540 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 NT5DC2Q9H857 520 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 ZNF395Q9H8N7 513 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 ACTR8Q9H981 624 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 EML4Q9HC35 981 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 FAM60AQ9NP50 221 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 MID1IP1Q9NPA3 183 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 THAP1Q9NVV9 213 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 GEMIN8Q9NWZ8 242 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 PILRAQ9UKJ1 303 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 BTRCQ9Y297 605 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 RNF11Q9Y3C5 154 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 KCNE1BA0A087WTH5 132 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 A8MU76 341 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 CTSVO60911 334 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 OR4F21O95013 312 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 FGF4P08620 206 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 JUPP14923 745 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 NELFEP18615 380 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 CXCR2P25025 360 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 CCKBRP32239 447 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 PDX1P52945 283 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 HSD11B2P80365 405 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 REEP5Q00765 189 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 GUCY1A3Q02108 690 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 PAGE2BQ5JRK9 111 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 GRHL2Q6ISB3 625 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 LETMD1Q6P1Q0 360 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 DHRS13Q6UX07 377 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 B3GNT8Q7Z7M8 397 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 CUZD1Q86UP6 607 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 CACTIN-AS1Q8N1I8 211 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 D2HGDHQ8N465 521 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 DNAJC22Q8N4W6 341 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 DCBLD1Q8N8Z6 715 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 LRRC8CQ8TDW0 803 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 CCDC74BQ96LY2 380 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 TMEM74Q96NL1 305 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 SORT1Q99523 831 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 SPNS1Q9H2V7 528 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 TNFRSF12AQ9NP84 129 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 TRPS1Q9UHF7 1281 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 ZNF490Q9ULM2 529 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 TRBC2A0A5B9 178 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 H0YIV9 168 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 TMX2-CTNND1H3BSU7 103 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 HAT1O14929 419 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 LCMT2O60294 686 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 NRP2O60462 931 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 LYPLA1O75608 230 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 MT-CO3P00414 261 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 ENO1P06733 434 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 EZRP15311 586 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 SPINK2P20155 84 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 GRK3P35626 688 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 GABRA4P48169 554 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 SEPHS1P49903 392 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 INHBCP55103 352 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 OCRLQ01968 901 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 MEF2AQ02078 507 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 SLBPQ14493 270 aaKnown RBP eCLIP11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 RNF44Q7L0R7 432 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 ADCK2Q7Z695 626 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 LAS2Q8IYD9 372 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 KRT78Q8N1N4 520 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 ZNF740Q8NDX6 193 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 ILKAPQ9H0C8 392 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 CCDC134Q9H6E4 229 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 PDE7BQ9NP56 450 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 HAO1Q9UJM8 370 aa11.89□□□□□ -0.51
NIF3L1-201ENST00000359683 FEZF1A0PJY2 475 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 C1QTNF9BB2RNN3 333 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 MAP3K7O43318 606 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 HSPA4LO95757 839 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 MSL3P1P0C860 447 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 C1QTNF9P0C862 333 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 HGFP14210 728 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 SCTRP47872 440 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 RPS15AP62244 130 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 CPSF6Q16630 551 aaKnown RBP eCLIP11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 HIST2H2ACQ16777 129 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 ISXQ2M1V0 245 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 ZC3H12BQ5HYM0 836 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 PHF19Q5T6S3 580 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 HIST2H2AA3Q6FI13 130 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 MED27Q6P2C8 311 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 UNQ6494/PRO21346Q6UXR6 183 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 TMIGD1Q6UXZ0 262 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 PLD3Q8IV08 490 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 CLYBLQ8N0X4 340 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms