RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 MINDY4Q4G0A6 757 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 OLFML2AQ68BL7 652 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 PSAPL1Q6NUJ1 521 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 VITQ6UXI7 678 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 SCAIQ8N9R8 606 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 ZNF461Q8TAF7 563 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 GPR151Q8TDV0 419 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 SLC22A17Q8WUG5 538 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 NRG4Q8WWG1 115 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 CMTM7Q96FZ5 175 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 CRELD1Q96HD1 420 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 ZNF696Q9H7X3 374 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 PCDHGA10Q9Y5H3 936 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 COL14A1Q05707 1796 aaKnown RBP13.33□□□□□ -0.28
VCP-201ENST00000358901 LRP6O75581 1613 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 H0YAE9 185 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 GNB5O14775 395 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 AXIN1O15169 862 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 GJB5O95377 273 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 MATN4O95460 622 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 IGFBP4P22692 258 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 MAGEA11P43364 429 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 SNAP47Q5SQN1 464 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 SMYD5Q6GMV2 418 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 TMIGD1Q6UXZ0 262 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 ISCA2Q86U28 154 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 JAZF1Q86VZ6 243 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 PEX13Q92968 403 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 PRICKLE1Q96MT3 831 aaPredicted RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 RDH12Q96NR8 316 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 ALPK1Q96QP1 1244 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 RHCGQ9UBD6 479 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 TAC3Q9UHF0 121 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 PPIEQ9UNP9 301 aaKnown RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 SOCS2O14508 198 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 XKRYO14609 159 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 CH25HO95992 272 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 ALPPP05187 535 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 CD68P34810 354 aaPredicted RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 MPIP34949 423 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 TGFBR2P37173 567 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 PIK3CBP42338 1070 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 CLK3P49761 638 aaKnown RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 TUBA1BP68363 451 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 NFATC2Q13469 925 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 ZNF789Q5FWF6 425 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 TLDC1Q6P9B6 456 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 RANBP10Q6VN20 620 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 TUBA1AQ71U36 451 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 TMC8Q8IU68 726 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 TMEM40Q8WWA1 233 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 PIGKQ92643 395 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 SCAMP4Q969E2 229 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 CAMK1GQ96NX5 476 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 NECTIN3Q9NQS3 549 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 MBD2Q9UBB5 411 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 NFKBIL1Q9UBC1 381 aaPredicted RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 P2RX2Q9UBL9 471 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 DLGAP4Q9Y2H0 992 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 RGPD2P0DJD1 1756 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 A6NHS1 94 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 ERI3O43414 337 aaKnown RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 RASAL1O95294 804 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 STATHP02808 62 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 TFPIP10646 304 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 BCKDHAP12694 445 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 IL4RP24394 825 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 SLC6A4P31645 630 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 CCR8P51685 355 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 NOXRED1Q6NXP6 359 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 SLC30A6Q6NXT4 461 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 SUSD1Q6UWL2 747 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 CPA6Q8N4T0 437 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 OR8J3Q8NGG0 315 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 TFGQ92734 400 aaPredicted RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 C5orf34Q96MH7 638 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 BARD1Q99728 777 aaKnown RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 GAL3ST1Q99999 423 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 CCM2Q9BSQ5 444 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 UCK2Q9BZX2 261 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 GPN1Q9HCN4 374 aaPredicted RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 CCDC59Q9P031 241 aaKnown RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 NUP188Q5SRE5 1749 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 SMIM30A4D0T7 59 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 EDN1P05305 212 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 GCAP28676 217 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 CLCNKAP51800 687 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 CSTF1Q05048 431 aaKnown RBP13.32□□□□□ -0.28
VCP-201ENST00000358901 OR4D1Q15615 310 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 ALG11Q2TAA5 492 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 SLC25A24Q6NUK1 477 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 ASB18Q6ZVZ8 466 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 OR6K6Q8NGW6 343 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 NUS1Q96E22 293 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 SLC22A4Q9H015 551 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 DPEP2Q9H4A9 486 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 SLC35C2Q9NQQ7 365 aa13.32□□□□□ -0.28
VCP-201ENST00000358901 NME4O00746 187 aa13.31□□□□□ -0.28
VCP-201ENST00000358901 C6orf47O95873 294 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms