RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 OR2AP1Q8NGE2 309 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 OR2L2Q8NH16 312 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 GNPDA2Q8TDQ7 276 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 HMGB4Q8WW32 186 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CD180Q99467 661 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 MTERF1Q99551 399 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 FAM83CQ9BQN1 747 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 COQ10BQ9H8M1 238 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 POPDC3Q9HBV1 291 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 NOCTQ9UK39 431 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 A0A0U1RQJ8 604 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 TRBC2A0A5B9 178 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CPED1A4D0V7 1026 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 C2orf71A6NGG8 1288 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 E7EQ34 232 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ECI2O75521 394 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 PGLSO95336 258 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 FARS2O95363 451 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 HRGP04196 525 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 HCKP08631 526 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CD48P09326 243 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 MATN1P21941 496 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 TCEA1P23193 301 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 PEX2P28328 305 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 GDI1P31150 447 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ADAM17P78536 824 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 MYLK3Q32MK0 819 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 OR2T5Q6IEZ7 315 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 TMEM214Q6NUQ4 689 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 RPL13AP3Q6NVV1 102 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 C3orf33Q6P1S2 294 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 UNQ6126/PRO20091Q6UXV3 157 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 MOB2Q70IA6 237 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CLIP4Q8N3C7 705 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 GALNT15Q8N3T1 639 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 OR2T29Q8NH02 315 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 PCDH19Q8TAB3 1148 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 FAM110BQ8TC76 370 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 TMEM234Q8WY98 164 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 OSTF1Q92882 214 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ZNF641Q96N77 438 aaPredicted RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 RBP7Q96R05 134 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 TUBA1CQ9BQE3 449 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 TMEM184CQ9NVA4 438 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 SCML2Q9UQR0 700 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 POMPQ9Y244 141 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CDC7O00311 574 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 PIGRP01833 764 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ITGA5P08648 1049 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ALPIP09923 528 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 EBLN1P0CF75 366 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 PRKCHP24723 683 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 UGT2B10P36537 528 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 GNG2P59768 71 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ABRAXAS2Q15018 415 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 NPTX1Q15818 432 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 SLC9A4Q6AI14 798 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 SYCE2Q6PIF2 218 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 BAIAP2L2Q6UXY1 529 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ZNF550Q7Z398 422 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 GID4Q8IVV7 300 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ARHGAP12Q8IWW6 846 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 SLC5A11Q8WWX8 675 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 LRRC58Q96CX6 371 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 BORCS8Q96FH0 119 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 RPL10LQ96L21 214 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 C12orf42Q96LP6 360 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 SAMD11Q96NU1 681 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CHIAQ9BZP6 476 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 DERL2Q9GZP9 239 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 DZANK1Q9NVP4 752 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 PRODH2Q9UF12 536 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 IFT52Q9Y366 437 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ADGRB1O14514 1584 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 MAP2P11137 1827 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 ARVCFO00192 962 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 TP53I11O14683 189 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 KDELR3O43731 214 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 SHOX2O60902 331 aaPredicted RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 BCHEP06276 602 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 RPL10P27635 214 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 ATP4BP51164 291 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 PLP2Q04941 152 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 EFR3AQ14156 821 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 FAM76BQ5HYJ3 339 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CDKL4Q5MAI5 379 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 MEDAGQ5VYS4 303 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 NCEH1Q6PIU2 408 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ZC3HC1Q86WB0 502 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 DCUN1D3Q8IWE4 304 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 FITM2Q8N6M3 262 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 ZNF709Q8N972 641 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 BBS10Q8TAM1 723 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 MAPK15Q8TD08 544 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CREB3L1Q96BA8 519 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 TAMM41Q96BW9 452 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 S100A16Q96FQ6 103 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 TMEM80Q96HE8 168 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 TRIB3Q96RU7 358 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CGREF1Q99674 301 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms