RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ZNF124Q15973 351 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 PABPC1L2AQ5JQF8 200 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 KCTD11Q693B1 232 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 C17orf107Q6ZR85 190 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 CEP68Q76N32 757 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 ADGRD2Q7Z7M1 963 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 JAZF1Q86VZ6 243 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 EFHBQ8N7U6 833 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 DCBLD1Q8N8Z6 715 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 OR8J3Q8NGG0 315 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 OR8D4Q8NGM9 314 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 USP7Q93009 1102 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 KCTD15Q96SI1 283 aaPredicted RBP15.27■□□□□ 0.03
RTN3-205ENST00000356000 CNPPD1Q9BV87 410 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 GPR63Q9BZJ6 419 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 FOLH1BQ9HBA9 442 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 M0QYV0 167 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 GNB5O14775 395 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 SCELO95171 688 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 PRKAR1AP10644 381 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 LHCGRP22888 699 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 ADRA1BP35368 520 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 LAPTM4AQ15012 233 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 SLFN12LQ6IEE8 588 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 SIAH1Q8IUQ4 282 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 LRRC17Q8N6Y2 441 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 ATG16L2Q8NAA4 619 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 FAM162AQ96A26 154 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 MYO19Q96H55 970 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 MSTO1Q9BUK6 570 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 XYLT2Q9H1B5 865 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 MID1IP1Q9NPA3 183 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 DCAF13Q9NV06 445 aaKnown RBP15.26■□□□□ 0.03
RTN3-205ENST00000356000 NDRG2Q9UN36 371 aaKnown RBP15.26■□□□□ 0.03
RTN3-205ENST00000356000 USP3Q9Y6I4 520 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 RNF215Q9Y6U7 377 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 INMT-MINDY4F8WBC2 141 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 QSOX1O00391 747 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 MFSD11O43934 449 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 STSP08842 583 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 HOXB6P17509 224 aaKnown RBP15.26■□□□□ 0.03
RTN3-205ENST00000356000 IL1RNP18510 177 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 HK1P19367 917 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 MAN2A2P49641 1150 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 TSTQ16762 297 aaKnown RBP15.26■□□□□ 0.03
RTN3-205ENST00000356000 DOK7Q18PE1 504 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 CARD16Q5EG05 197 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 ARHGAP17Q68EM7 881 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 NADSYN1Q6IA69 706 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 ERICH5Q6P6B1 374 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 TMEM107Q6UX40 140 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 EIF3MQ7L2H7 374 aaKnown RBP15.26■□□□□ 0.03
RTN3-205ENST00000356000 METTL23Q86XA0 190 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 EXOC2Q96KP1 924 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 CDHR5Q9HBB8 845 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 ZIM2Q9NZV7 527 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 NEUROG3Q9Y4Z2 214 aa15.26■□□□□ 0.03
RTN3-205ENST00000356000 ADM5C9JUS6 153 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 ACKR2O00590 384 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 LYRM1O43325 122 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 C9P02748 559 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 H2AFB1P0C5Y9 115 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 H2AFB2P0C5Z0 115 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 ZNF81P51508 661 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 CSTF1Q05048 431 aaKnown RBP15.25■□□□□ 0.03
RTN3-205ENST00000356000 DACT2Q5SW24 774 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 C10orf62Q5T681 223 aaPredicted RBP15.25■□□□□ 0.03
RTN3-205ENST00000356000 FAM92BQ6ZTR7 304 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 ZFAND4Q86XD8 727 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 STPG2Q8N412 459 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 CHCHD4Q8N4Q1 142 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 OR6C4Q8NGE1 309 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 DIRAS2Q96HU8 199 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 MSLNLQ96KJ4 702 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 TTPALQ9BTX7 342 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 TMEM45AQ9NWC5 275 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 TSR3Q9UJK0 312 aaKnown RBP15.25■□□□□ 0.03
RTN3-205ENST00000356000 PCDHGA6Q9Y5G7 932 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 ARNTLO00327 626 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 CXCR6O00574 342 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 CD3EAPO15446 510 aaKnown RBP15.25■□□□□ 0.03
RTN3-205ENST00000356000 GREM1O60565 184 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 MMP20O60882 483 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 OR4F21O95013 312 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 PIGRP01833 764 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 TPH1P17752 444 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 HERVK_113P63132 956 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 EIF4HQ15056 248 aaKnown RBP15.25■□□□□ 0.03
RTN3-205ENST00000356000 OR4F3Q6IEY1 312 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 DDX53Q86TM3 631 aaKnown RBP15.25■□□□□ 0.03
RTN3-205ENST00000356000 C19orf18Q8NEA5 215 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 GMCL1P1Q8NEA9 526 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 ZBED3Q96IU2 234 aaPredicted RBP15.25■□□□□ 0.03
RTN3-205ENST00000356000 ERVK-6Q9BXR3 956 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 NMUR1Q9HB89 426 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 AGO4Q9HCK5 861 aaKnown RBP15.25■□□□□ 0.03
RTN3-205ENST00000356000 TRPM5Q9NZQ8 1165 aa15.25■□□□□ 0.03
RTN3-205ENST00000356000 TP53BP1Q12888 1972 aaPredicted RBP15.25■□□□□ 0.03
RTN3-205ENST00000356000 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
RTN3-205ENST00000356000 ERI2A8K979 691 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms