RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 IGLV3-16A0A075B6K0 115 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 GABRR3A8MPY1 467 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 SCN2BO60939 215 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 NADKO95544 446 aaPredicted RBP18.9■□□□□ 0.62
COL13A1-201ENST00000354547 VIPP01282 170 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 CD6P30203 668 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 RECQLP46063 649 aaPredicted RBP18.9■□□□□ 0.62
COL13A1-201ENST00000354547 MASP1P48740 699 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 PAGE2BQ5JRK9 111 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 KDM4DQ6B0I6 523 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 AGTRAPQ6RW13 159 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 OR4K1Q8NGD4 311 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 SPPL2AQ8TCT8 520 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 ZFP90Q8TF47 636 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 SH3YL1Q96HL8 342 aaPredicted RBP18.9■□□□□ 0.62
COL13A1-201ENST00000354547 KCNC2Q96PR1 638 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 TPRKBQ9Y3C4 175 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 TESMINQ9Y4I5 508 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 ACPPP15309 386 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 HOXA9P31269 272 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 TRPC1P48995 793 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 TLE2Q04725 743 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 SRSF11Q05519 484 aaKnown RBP18.9■□□□□ 0.62
COL13A1-201ENST00000354547 ARSIQ5FYB1 569 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 RPS6KA6Q9UK32 745 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 HS3ST2Q9Y278 367 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 CDH23Q9H251 3354 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 FUOMA2VDF0 154 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 CBFA2T3O75081 653 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 SLC16A8O95907 504 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 ITGAMP11215 1152 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 ZNF12P17014 697 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 FPR1P21462 350 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 OR1E2P47887 323 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 CREMQ03060 361 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 CPTPQ5TA50 214 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 ANKRD13BQ86YJ7 626 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 CAPNS2Q96L46 248 aa18.9■□□□□ 0.62
COL13A1-201ENST00000354547 TRNAU1APQ9NX07 287 aaKnown RBP18.9■□□□□ 0.62
COL13A1-201ENST00000354547 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.9■□□□□ 0.62
COL13A1-201ENST00000354547 PLXNB3Q9ULL4 1909 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 FADS2P1A8MWK0 482 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 LEFTY1O75610 366 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 LCKP06239 509 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 PDHA2P29803 388 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 CRATP43155 626 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 RPP38P78345 283 aaKnown RBP18.89■□□□□ 0.61
COL13A1-201ENST00000354547 PLEKHS1Q5SXH7 462 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 IER5LQ5T953 404 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 RAVER1Q8IY67 606 aaKnown RBP18.89■□□□□ 0.61
COL13A1-201ENST00000354547 CPXM2Q8N436 756 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 TMEM159Q96B96 161 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 SAMD11Q96NU1 681 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 OR4K3Q96R72 315 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 APOL4Q9BPW4 351 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 CHCHD3Q9NX63 227 aaKnown RBP18.89■□□□□ 0.61
COL13A1-201ENST00000354547 DAPK2Q9UIK4 370 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 MGAT4DA6NG13 374 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 GRM6O15303 877 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 MYO1DO94832 1006 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 ARHGEF15O94989 841 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 C8AP07357 584 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 GPX2P18283 190 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 CCR2P41597 374 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 PTPN5P54829 565 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 SLC35A2P78381 396 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 MTAPQ13126 283 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 CLCA4Q14CN2 919 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 SYT16Q17RD7 645 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 FAM180BQ6P0A1 224 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 CCDC71Q8IV32 467 aaPredicted RBP18.89■□□□□ 0.61
COL13A1-201ENST00000354547 NAGSQ8N159 534 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 OR2A12Q8NGT7 310 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 TCEAL4Q96EI5 215 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 TBCCD1Q9NVR7 557 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 ERGIC3Q9Y282 383 aa18.89■□□□□ 0.61
COL13A1-201ENST00000354547 TTC34A8MYJ7 566 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 SGTAO43765 313 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 CXCL10P02778 98 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 MPC1LP0DKB6 136 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 RRM2P31350 389 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 KRT20P35900 424 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 AP1S2P56377 157 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 GAB1Q13480 694 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 TRIM16LQ309B1 348 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 ZC3H12BQ5HYM0 836 aaKnown RBP18.88■□□□□ 0.61
COL13A1-201ENST00000354547 CDKL4Q5MAI5 379 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 MPP7Q5T2T1 576 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 ADCK1Q86TW2 530 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 METTL3Q86U44 580 aaKnown RBP18.88■□□□□ 0.61
COL13A1-201ENST00000354547 TMEM247A6NEH6 219 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 CLDN25C9JDP6 229 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 XPAP23025 273 aaPredicted RBP18.88■□□□□ 0.61
COL13A1-201ENST00000354547 SLC7A9P82251 487 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 IL18R1Q13478 541 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 EIF3MQ7L2H7 374 aaKnown RBP18.88■□□□□ 0.61
COL13A1-201ENST00000354547 TMPRSS11BQ86T26 416 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 TRIM74Q86UV6 250 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 P2RY8Q86VZ1 359 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 CLP1Q92989 425 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms