RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 BNC1Q01954 994 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 PLEKHG6Q3KR16 790 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 AQP11Q8NBQ7 271 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 C1QTNF1Q9BXJ1 281 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 PRRG4Q9BZD6 226 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 POPDC3Q9HBV1 291 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 MYH7P12883 1935 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 C8orf89P0DMQ9 161 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 MASP1P48740 699 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 NANOGP8Q6NSW7 305 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 NPAS3Q8IXF0 933 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 NPWQ8N729 165 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 HMGB4Q8WW32 186 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 NANOGQ9H9S0 305 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 MED31Q9Y3C7 131 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 EDDM13A0A1B0GTR0 161 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 FGF18O76093 207 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 SYN1P17600 705 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 ACVR2AP27037 513 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 HNF1BP35680 557 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 GNALP38405 381 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 ABHD18Q0P651 414 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 NFATC2Q13469 925 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 KBTBD7Q8WVZ9 684 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 ZDHHC4Q9NPG8 344 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 DUXAA6NLW8 204 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 CHRM1P11229 460 aaPredicted RBP15.55■□□□□ 0.08
PTPN11-201ENST00000351677 HOXA11P31270 313 aaPredicted RBP15.55■□□□□ 0.08
PTPN11-201ENST00000351677 TMIGD1Q6UXZ0 262 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 SYVN1Q86TM6 617 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 SLC5A11Q8WWX8 675 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 RHCGQ9UBD6 479 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 HTRA2O43464 458 aaPredicted RBP15.55■□□□□ 0.08
PTPN11-201ENST00000351677 FAM189A1O60320 539 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 STK19P49842 368 aaPredicted RBP15.55■□□□□ 0.08
PTPN11-201ENST00000351677 GMFBP60983 142 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 TOR1AIP1Q5JTV8 583 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 ZNF648Q5T619 568 aaPredicted RBP15.55■□□□□ 0.08
PTPN11-201ENST00000351677 TICAM1Q8IUC6 712 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 OR4K1Q8NGD4 311 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 YTHDF1Q9BYJ9 559 aaKnown RBP15.55■□□□□ 0.08
PTPN11-201ENST00000351677 ANKRA2Q9H9E1 313 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 COPS7AQ9UBW8 275 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 SOX14O95416 240 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 S1PR4O95977 384 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 SOD2P04179 222 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 C8BP07358 591 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 IQCF3P0C7M6 154 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 CCL5P13501 91 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 ATP4BP51164 291 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 NIPAL4Q0D2K0 466 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 CYP27C1Q4G0S4 372 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 UNC50Q53HI1 259 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 AURKBQ96GD4 344 aaPredicted RBP15.55■□□□□ 0.08
PTPN11-201ENST00000351677 GSDMCQ9BYG8 508 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 DCSTAMPQ9H295 470 aa15.55■□□□□ 0.08
PTPN11-201ENST00000351677 ELAC1Q9H777 363 aaKnown RBP15.55■□□□□ 0.08
PTPN11-201ENST00000351677 FARSBQ9NSD9 589 aaKnown RBP15.55■□□□□ 0.08
PTPN11-201ENST00000351677 FAM120CQ9NX05 1096 aaKnown RBP15.55■□□□□ 0.08
PTPN11-201ENST00000351677 CH25HO95992 272 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 SRPRAP08240 638 aaKnown RBP15.54■□□□□ 0.08
PTPN11-201ENST00000351677 BCAP31P51572 246 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 RAB8AP61006 207 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 PTGR1Q14914 329 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 ADNP2Q6IQ32 1131 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 TMEM135Q86UB9 458 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 DENND1AQ8TEH3 1009 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 SMPDL3AQ92484 453 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 JSRP1Q96MG2 331 aaPredicted RBP15.54■□□□□ 0.08
PTPN11-201ENST00000351677 CAMK1GQ96NX5 476 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 ANKHQ9HCJ1 492 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 IGKV6-21A0A0C4DH24 114 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 MEIS3P2A8K0S8 358 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 ACOX3O15254 700 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 TPTEP56180 551 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 RPL26P61254 145 aaKnown RBP15.54■□□□□ 0.08
PTPN11-201ENST00000351677 AMZ1Q400G9 498 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 IFNLR1Q8IU57 520 aaPredicted RBP15.54■□□□□ 0.08
PTPN11-201ENST00000351677 UMODL1-AS1Q8N2C9 162 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 KRTCAP2Q8N6L1 136 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 SCAMP4Q969E2 229 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 SLC22A18Q96BI1 424 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 TAPBPLQ9BX59 468 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 IGKV6D-21A0A0A0MT36 114 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 B4DGG1 531 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 FPR1P21462 350 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 CLCN7P51798 805 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 NRSN1Q8IZ57 195 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 POLMQ9NP87 494 aaPredicted RBP15.54■□□□□ 0.08
PTPN11-201ENST00000351677 GOLGA4Q13439 2230 aaKnown RBP15.54■□□□□ 0.08
PTPN11-201ENST00000351677 RGPD5Q99666 1765 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 MYOCOSA0A1B0GUC4 107 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 A8MUA0 341 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 J3QRK9 145 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 ABHD13Q7L211 337 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 OR4E2Q8NGC2 313 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 TMEM40Q8WWA1 233 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 FBXL8Q96CD0 374 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 ZNF382Q96SR6 550 aa15.54■□□□□ 0.08
PTPN11-201ENST00000351677 PNO1Q9NRX1 252 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms