RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SNX6Q9UNH7 406 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 GPR34Q9UPC5 381 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 EIF3LQ9Y262 564 aaKnown RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 TMED5Q9Y3A6 229 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 OR1A2Q9Y585 309 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 PCDHB14Q9Y5E9 798 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 A0A1W2PQF6 199 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 FAM221BA6H8Z2 402 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 MGAT4DA6NG13 374 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 NVLO15381 856 aaKnown RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 KLF8O95600 359 aaPredicted RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 GSTP1P09211 210 aaKnown RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 JUPP14923 745 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 SLC6A2P23975 617 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 ACADLP28330 430 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 IRF8Q02556 426 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 PRKG2Q13237 762 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 NFYCQ13952 458 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 TRIM25Q14258 630 aaKnown RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 KIAA0040Q15053 153 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 XKR6Q5GH73 641 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 COQ5Q5HYK3 327 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 SAMD4BQ5PRF9 694 aaKnown RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 C6orf10Q5SRN2 563 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 DHDDSQ86SQ9 333 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 SLC15A3Q8IY34 581 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 KBTBD2Q8IY47 623 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 MINDY1Q8N5J2 469 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 KRTCAP2Q8N6L1 136 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 OR56A3Q8NH54 315 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 OR14C36Q8NHC7 312 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 DNAJB14Q8TBM8 379 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 HM13Q8TCT9 377 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 TSPEARQ8WU66 669 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 ZNF480Q8WV37 535 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 ATL1Q8WXF7 558 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 ASB9Q96DX5 294 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 NECTIN4Q96NY8 510 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 NRTNQ99748 197 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 HOPXQ9BPY8 73 aaPredicted RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 ZDHHC5Q9C0B5 715 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 TTYH1Q9H313 450 aaPredicted RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 GID8Q9NWU2 228 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 C1orf109Q9NX04 203 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 SH2B3Q9UQQ2 575 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 POLR3KQ9Y2Y1 108 aaPredicted RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 LRRC42Q9Y546 428 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 PIAS3Q9Y6X2 628 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 GOLGA4Q13439 2230 aaKnown RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 C17orf113A0A1B0GUU1 675 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 A0A1W2PQU0 124 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 C2CD4DB7Z1M9 353 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 BCKDHAP12694 445 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 HOXB2P14652 356 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 JAK1P23458 1154 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 MAPK9P45984 424 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 PLIN5Q00G26 463 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 TSTA3Q13630 321 aaPredicted RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 DOC2AQ14183 400 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 STARD3Q14849 445 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 TAF11Q15544 211 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 USP39Q53GS9 565 aaKnown RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 FRG2Q64ET8 278 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 ADNP2Q6IQ32 1131 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 CYP2R1Q6VVX0 501 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 AMZ2Q86W34 360 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 SPATA24Q86W54 205 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 KLHDC8AQ8IYD2 350 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 CACTIN-AS1Q8N1I8 211 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 TP53I13Q8NBR0 393 aaPredicted RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 APIPQ96GX9 242 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 FRG2BQ96QU4 278 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 OR52A5Q9H2C5 316 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 DPEP2Q9H4A9 486 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 ABCD2Q9UBJ2 740 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 LEF1Q9UJU2 399 aaPredicted RBP8.92□□□□□ -0.98
ATG4A-202ENST00000345734 PLAGL1Q9UM63 463 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 PSMD13Q9UNM6 376 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 DLGAP4Q9Y2H0 992 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 PCDHA9Q9Y5H5 950 aa8.92□□□□□ -0.98
ATG4A-202ENST00000345734 FUCA1P04066 466 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 CTSBP07858 339 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 MAT2AP31153 395 aaKnown RBP8.91□□□□□ -0.98
ATG4A-202ENST00000345734 TBPL1P62380 186 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 MAD2L1Q13257 205 aaPredicted RBP8.91□□□□□ -0.98
ATG4A-202ENST00000345734 MUM1Q2TAK8 710 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 SMU1Q2TAY7 513 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 RABL3Q5HYI8 236 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 CACHD1Q5VU97 1274 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 LIPJQ5W064 366 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 SDE2Q6IQ49 451 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 PRMT9Q6P2P2 845 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 LRRTM4Q86VH4 590 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 SYTL1Q8IYJ3 562 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 KIAA2013Q8IYS2 634 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 ZBTB8BQ8NAP8 495 aaPredicted RBP8.91□□□□□ -0.98
ATG4A-202ENST00000345734 FBXO15Q8NCQ5 510 aaPredicted RBP8.91□□□□□ -0.98
ATG4A-202ENST00000345734 OR9A1PQ8NGU1 263 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 GPBAR1Q8TDU6 330 aa8.91□□□□□ -0.98
ATG4A-202ENST00000345734 DNAJC9Q8WXX5 260 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms