RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 LRRN3E7EW58 273 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 GTPBP1O00178 669 aaKnown RBP17.58■□□□□ 0.41
SMC4-201ENST00000344722 EPHX2P34913 555 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 BEX3Q00994 111 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 DESI1Q6ICB0 168 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 SLC36A4Q6YBV0 504 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 ZNF382Q96SR6 550 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 LRRN3Q9H3W5 708 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 IFT46Q9NQC8 304 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 ABCB8Q9NUT2 735 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 TMEM181Q9P2C4 612 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 EXTL2Q9UBQ6 330 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 STYXL1Q9Y6J8 313 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 ENPP3O14638 875 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 S100GP29377 79 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 DNASE1L1P49184 302 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 ALG11Q2TAA5 492 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 NDNFQ8TB73 568 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 ZNF354BQ96LW1 612 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 PPIL3Q9H2H8 161 aaKnown RBP17.58■□□□□ 0.4
SMC4-201ENST00000344722 ZFP37Q9Y6Q3 630 aaPredicted RBP17.58■□□□□ 0.4
SMC4-201ENST00000344722 A0A096LPI6 279 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 VILLO15195 856 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 ATE1O95260 518 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 CLK3P49761 638 aaKnown RBP17.58■□□□□ 0.4
SMC4-201ENST00000344722 FADDQ13158 208 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 GRM2Q14416 872 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 ARL9Q6T311 187 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 NOXA1Q86UR1 476 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 ADGRG2Q8IZP9 1017 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 STOML3Q8TAV4 291 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 THAP6Q8TBB0 222 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 DNASE1L2Q92874 299 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 CMTM7Q96FZ5 175 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 TBX5Q99593 518 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 LPIN3Q9BQK8 851 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 ACTR6Q9GZN1 396 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 DNAJC27Q9NZQ0 273 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 HCN3Q9P1Z3 774 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 MYH10P35580 1976 aa17.58■□□□□ 0.4
SMC4-201ENST00000344722 DCKP27707 260 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 OR4D2P58180 307 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 KCNJ8Q15842 424 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 EIPR1Q53HC9 387 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 RD3Q7Z3Z2 195 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 ZDHHC14Q8IZN3 488 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 GHDCQ8N2G8 530 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 NFKBIDQ8NI38 313 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 SCRN2Q96FV2 425 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 NDC1Q9BTX1 674 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 ALPPP05187 535 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 EPCAMP16422 314 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 GGT1P19440 569 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 S100A2P29034 98 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 STC1P52823 247 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 NPRL3Q12980 569 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 UBE2UQ5VVX9 321 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 DPCDQ9BVM2 203 aaPredicted RBP17.57■□□□□ 0.4
SMC4-201ENST00000344722 TSSK6Q9BXA6 273 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 PCDHGB5Q9Y5G0 923 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 A0A1B0GVM2 712 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 MYBPHLA2RUH7 354 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 SHQ1Q6PI26 577 aaKnown RBP17.57■□□□□ 0.4
SMC4-201ENST00000344722 COMMD7Q86VX2 200 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 SLC9A6Q92581 669 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 GPN2Q9H9Y4 310 aaPredicted RBP17.57■□□□□ 0.4
SMC4-201ENST00000344722 C5orf51A6NDU8 294 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 LEPRP48357 1165 aaKnown RBP17.57■□□□□ 0.4
SMC4-201ENST00000344722 VGLL4Q14135 290 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 CRY2Q49AN0 593 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 FAM76BQ5HYJ3 339 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 TMEM135Q86UB9 458 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 TSPYL5Q86VY4 417 aaPredicted RBP17.57■□□□□ 0.4
SMC4-201ENST00000344722 VWA5B2Q8N398 1253 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 RHEBL1Q8TAI7 183 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 SPATA9Q9BWV2 254 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 STUB1Q9UNE7 303 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 NME4O00746 187 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 WNT9AO14904 365 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 CASP9P55211 416 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 UNC50Q53HI1 259 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 Q6ZNX1 250 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 PAQR7Q86WK9 346 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 SETD6Q8TBK2 473 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 RERGQ96A58 199 aaPredicted RBP17.57■□□□□ 0.4
SMC4-201ENST00000344722 HERPUD2Q9BSE4 406 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 SYNDIG1Q9H7V2 258 aa17.57■□□□□ 0.4
SMC4-201ENST00000344722 MCIDASD6RGH6 385 aa17.56■□□□□ 0.4
SMC4-201ENST00000344722 HAS3O00219 553 aa17.56■□□□□ 0.4
SMC4-201ENST00000344722 TEX28O15482 410 aa17.56■□□□□ 0.4
SMC4-201ENST00000344722 CDK14O94921 469 aa17.56■□□□□ 0.4
SMC4-201ENST00000344722 GLUD1P00367 558 aa17.56■□□□□ 0.4
SMC4-201ENST00000344722 PRH1P02810 166 aa17.56■□□□□ 0.4
SMC4-201ENST00000344722 CORO1AP31146 461 aaKnown RBP17.56■□□□□ 0.4
SMC4-201ENST00000344722 CDH11P55287 796 aa17.56■□□□□ 0.4
SMC4-201ENST00000344722 NOL9Q5SY16 702 aaKnown RBP17.56■□□□□ 0.4
SMC4-201ENST00000344722 CIR1Q86X95 450 aaPredicted RBP17.56■□□□□ 0.4
SMC4-201ENST00000344722 PHC3Q8NDX5 983 aa17.56■□□□□ 0.4
SMC4-201ENST00000344722 PPP1R13LQ8WUF5 828 aa17.56■□□□□ 0.4
SMC4-201ENST00000344722 P2RX2Q9UBL9 471 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms