RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 YIPF5Q969M3 257 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 CDK15Q96Q40 435 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 CYP2S1Q96SQ9 504 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 RTP3Q9BQQ7 232 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 FEM1AQ9BSK4 669 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 SLC6A15Q9H2J7 730 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 MBD2Q9UBB5 411 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 AASSQ9UDR5 926 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ZNF639Q9UID6 485 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 HS3ST4Q9Y661 456 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 DSCR3O14972 297 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 IRAK2O43187 625 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 B3GAT3O94766 335 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 CD1DP15813 335 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 MYL9P24844 172 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 AZGP1P25311 298 aaKnown RBP12.23□□□□□ -0.45
DFFB-202ENST00000339350 CD6P30203 668 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 RPS5P46782 204 aaKnown RBP12.23□□□□□ -0.45
DFFB-202ENST00000339350 SYT16Q17RD7 645 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 PDSS1Q5T2R2 415 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 KDELC1Q6UW63 502 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 HDDC2Q7Z4H3 204 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 RASGRP3Q8IV61 690 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 UBE2J2Q8N2K1 259 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 TBC1D19Q8N5T2 526 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 LINC00052Q96N35 136 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 PARK7Q99497 189 aaKnown RBP12.23□□□□□ -0.45
DFFB-202ENST00000339350 FAM83DQ9H4H8 585 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 NMUR1Q9HB89 426 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 ASPDHA6ND91 283 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 GRXCR2A6NFK2 248 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 RRN3P2A6NIE6 340 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 STX7O15400 261 aaKnown RBP12.23□□□□□ -0.45
DFFB-202ENST00000339350 ACVR2AP27037 513 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 MASP1P48740 699 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 PER3P56645 1201 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 CSNK2BP67870 215 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 BAMBIQ13145 260 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 FSCN1Q16658 493 aaKnown RBP12.23□□□□□ -0.45
DFFB-202ENST00000339350 SIRPB2Q5JXA9 342 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 TIGD7Q6NT04 549 aaPredicted RBP12.23□□□□□ -0.45
DFFB-202ENST00000339350 MRPL10Q7Z7H8 261 aaKnown RBP12.23□□□□□ -0.45
DFFB-202ENST00000339350 SLC44A2Q8IWA5 706 aaPredicted RBP12.23□□□□□ -0.45
DFFB-202ENST00000339350 TRIM43Q96BQ3 446 aaPredicted RBP12.23□□□□□ -0.45
DFFB-202ENST00000339350 ROPN1LQ96C74 230 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 TSPAN17Q96FV3 270 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 ARL5BQ96KC2 179 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 CMTM3Q96MX0 182 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 SLC30A3Q99726 388 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 NIPAL2Q9H841 368 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 MKLN1Q9UL63 735 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 NAALAD2Q9Y3Q0 740 aa12.23□□□□□ -0.45
DFFB-202ENST00000339350 NUP214P35658 2090 aaPredicted RBP12.23□□□□□ -0.45
DFFB-202ENST00000339350 SMIM35A0A1B0GVV1 85 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 TBC1D4O60343 1298 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 CDK1P06493 297 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 THP07101 528 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 RNF224P0DH78 156 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 FCGR1AP12314 374 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 MTHFD2P13995 350 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 LHX1P48742 406 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 AP1S2P56377 157 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 EEF1A1P68104 462 aaKnown RBP12.22□□□□□ -0.45
DFFB-202ENST00000339350 YWHAHQ04917 246 aaPredicted RBP12.22□□□□□ -0.45
DFFB-202ENST00000339350 EEF1A2Q05639 463 aaKnown RBP12.22□□□□□ -0.45
DFFB-202ENST00000339350 TRIP4Q15650 581 aaPredicted RBP12.22□□□□□ -0.45
DFFB-202ENST00000339350 FAM110CQ1W6H9 321 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 XKR4Q5GH76 650 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 EEF1A1P5Q5VTE0 462 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 TEX261Q6UWH6 196 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 SNX20Q7Z614 316 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 HS3ST5Q8IZT8 346 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 TMEM125Q96AQ2 219 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 DCLRE1CQ96SD1 692 aaKnown RBP12.22□□□□□ -0.45
DFFB-202ENST00000339350 RHNO1Q9BSD3 238 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 ZCCHC4Q9H5U6 513 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 RNF167Q9H6Y7 350 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 AGO3Q9H9G7 860 aaKnown RBP12.22□□□□□ -0.45
DFFB-202ENST00000339350 FAM118AQ9NWS6 357 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 CSNK1G3Q9Y6M4 447 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 U3KQ87 197 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 NOBOXO60393 691 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 SNX4O95219 450 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 TBX18O95935 607 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 ITGB1P05556 798 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 LBPP18428 481 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 KCNK10P57789 538 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 OR4D2P58180 307 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 MTPNP58546 118 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 TIAL1Q01085 375 aaKnown RBP eCLIP12.22□□□□□ -0.45
DFFB-202ENST00000339350 MLLT1Q03111 559 aaPredicted RBP12.22□□□□□ -0.45
DFFB-202ENST00000339350 TUSC1Q2TAM9 212 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 PHYKPLQ8IUZ5 450 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 TIGD4Q8IY51 512 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 OR6M1Q8NGM8 313 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 PPM1MQ96MI6 270 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 SMURF2Q9HAU4 748 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 GALPQ9UBC7 116 aa12.22□□□□□ -0.45
DFFB-202ENST00000339350 ELF5Q9UKW6 265 aaPredicted RBP12.22□□□□□ -0.45
DFFB-202ENST00000339350 CDC7O00311 574 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms