RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 SCAMP4Q969E2 229 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 SMG9Q9H0W8 520 aaKnown RBP17.24■□□□□ 0.35
IFFO1-201ENST00000336604 DUSP21Q9H596 190 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 KLHL42Q9P2K6 505 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 GFYI3L273 518 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 ATP1B2P14415 290 aaPredicted RBP17.23■□□□□ 0.35
IFFO1-201ENST00000336604 HOXB6P17509 224 aaKnown RBP17.23■□□□□ 0.35
IFFO1-201ENST00000336604 TCEA1P23193 301 aaKnown RBP17.23■□□□□ 0.35
IFFO1-201ENST00000336604 PSMB9P28065 219 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 HLA-FP30511 346 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 DNAJA1P31689 397 aaKnown RBP17.23■□□□□ 0.35
IFFO1-201ENST00000336604 INAVAQ3KP66 663 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 ADNP2Q6IQ32 1131 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 DPY19L3Q6ZPD9 716 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 CCDC71Q8IV32 467 aaPredicted RBP17.23■□□□□ 0.35
IFFO1-201ENST00000336604 ZNF540Q8NDQ6 660 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 FIBINQ8TAL6 211 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 GLMNQ92990 594 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 TPK1Q9H3S4 243 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 BRD9Q9H8M2 597 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 SIRT5Q9NXA8 310 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 B4GALT6Q9UBX8 382 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 MT-ND2P03891 347 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 SEMG1P04279 462 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 NUDT7P0C024 238 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 LAMP1P11279 417 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 JUPP14923 745 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 JUNDP17535 347 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 GPX2P18283 190 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 ACVR2AP27037 513 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 SPINT3P49223 89 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 NKX2-5P52952 324 aaPredicted RBP17.23■□□□□ 0.35
IFFO1-201ENST00000336604 PTPN5P54829 565 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 IRF8Q02556 426 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 KEAP1Q14145 624 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 PDE12Q6L8Q7 609 aaKnown RBP17.23■□□□□ 0.35
IFFO1-201ENST00000336604 TTC23LQ6PF05 361 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 Q8N9G6 341 aaPredicted RBP17.23■□□□□ 0.35
IFFO1-201ENST00000336604 ATG16L2Q8NAA4 619 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 FOXJ1Q92949 421 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 TBC1D20Q96BZ9 403 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 TPD52L3Q96J77 140 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 MCCC1Q96RQ3 725 aaPredicted RBP17.23■□□□□ 0.35
IFFO1-201ENST00000336604 ALOXE3Q9BYJ1 711 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 EHD1Q9H4M9 534 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 HMX1Q9NP08 348 aaPredicted RBP17.23■□□□□ 0.35
IFFO1-201ENST00000336604 KIF17Q9P2E2 1029 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 TPRKBQ9Y3C4 175 aa17.23■□□□□ 0.35
IFFO1-201ENST00000336604 NDUFB5O43674 189 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 CYP2A7P20853 494 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 FPR1P21462 350 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 AQP1P29972 269 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 TRPC1P48995 793 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 RAB33AQ14088 237 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 ACOX1Q15067 660 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 MPPE1Q53F39 396 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 PAGE2BQ5JRK9 111 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 C22orf39Q6P5X5 142 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 RAVER1Q8IY67 606 aaKnown RBP17.22■□□□□ 0.35
IFFO1-201ENST00000336604 ELMOD1Q8N336 334 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 POP5Q969H6 163 aaKnown RBP17.22■□□□□ 0.35
IFFO1-201ENST00000336604 SH3KBP1Q96B97 665 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 TMEM169Q96HH4 297 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 MRPL17Q9NRX2 175 aaKnown RBP17.22■□□□□ 0.35
IFFO1-201ENST00000336604 KRT84Q9NSB2 600 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 VPS29Q9UBQ0 182 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 SLCO3A1Q9UIG8 710 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 NDRG4Q9ULP0 352 aaKnown RBP17.22■□□□□ 0.35
IFFO1-201ENST00000336604 TMEM202A6NGA9 273 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 ZBBXA8MT70 800 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 M0R3G1 203 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 EIF3FO00303 357 aaPredicted RBP17.22■□□□□ 0.35
IFFO1-201ENST00000336604 AOC2O75106 756 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 NCS1P62166 190 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 CLCA4Q14CN2 919 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 XKR6Q5GH73 641 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 ZNF648Q5T619 568 aaPredicted RBP17.22■□□□□ 0.35
IFFO1-201ENST00000336604 P2RY8Q86VZ1 359 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 HS6ST3Q8IZP7 471 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 MYLIPQ8WY64 445 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 ELMO1Q92556 727 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 MAL2Q969L2 176 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 RPS6KA6Q9UK32 745 aa17.22■□□□□ 0.35
IFFO1-201ENST00000336604 PLXNB3Q9ULL4 1909 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 OR2AG2A6NM03 316 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 E7EQ34 232 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 MYCP01106 439 aaPredicted RBP17.21■□□□□ 0.35
IFFO1-201ENST00000336604 SRSF11Q05519 484 aaKnown RBP17.21■□□□□ 0.35
IFFO1-201ENST00000336604 TCEAL8Q8IYN2 117 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 CHST14Q8NCH0 376 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 APOL4Q9BPW4 351 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 AKIP1Q9NQ31 210 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 THUMPD1Q9NXG2 353 aaKnown RBP17.21■□□□□ 0.35
IFFO1-201ENST00000336604 SCN3BQ9NY72 215 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 NPIPB8E9PQR5 432 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 NADKO95544 446 aaPredicted RBP17.21■□□□□ 0.35
IFFO1-201ENST00000336604 KRT20P35900 424 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 CRYBA2P53672 197 aa17.21■□□□□ 0.35
IFFO1-201ENST00000336604 MAD2L1BPQ15013 274 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms