RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 PAPLNO95428 1278 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 C1QCP02747 245 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 IL1RNP18510 177 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 LAPTM5Q13571 262 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 TMEM52BQ4KMG9 183 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 FAM109BQ6ICB4 259 aaPredicted RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 MED27Q6P2C8 311 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 ERN2Q76MJ5 926 aaKnown RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 TRMT11Q7Z4G4 463 aaKnown RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 SERPINA11Q86U17 422 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 MMAAQ8IVH4 418 aaKnown RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 STARD8Q92502 1023 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 ERLEC1Q96DZ1 483 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 ZNF514Q96K75 400 aaPredicted RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 LINC00615Q96LM1 132 aaPredicted RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 A0A087WXM4 84 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 TRIM64CA6NLI5 447 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 H3BSA7 217 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 GNGT2O14610 69 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 SCAMP2O15127 329 aaKnown RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 TRMUO75648 421 aaKnown RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 HPRP00739 348 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 THRBP10828 461 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 LAMP1P11279 417 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 NPPBP16860 134 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 ZNF8P17098 575 aaPredicted RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 FSHRP23945 695 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 CCR3P51677 355 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 TSTA3Q13630 321 aaPredicted RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 STARD3Q14849 445 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 ZIK1Q3SY52 487 aaPredicted RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 CATSPEREQ5SY80 951 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 ANKRD26P1Q6NSI1 321 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 CRTC3Q6UUV7 619 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 ZNF621Q6ZSS3 439 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 FKBP9P1Q75LS8 142 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 GET4Q7L5D6 327 aaPredicted RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 CLECL1Q8IZS7 167 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 OR9A1PQ8NGU1 263 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 POP5Q969H6 163 aaKnown RBP16.79■□□□□ 0.28
DDX28-201ENST00000332395 ZDHHC4Q9NPG8 344 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 ERVK-11Q9UQG0 969 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 SH2B3Q9UQQ2 575 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 POP7O75817 140 aaKnown RBP16.78■□□□□ 0.28
DDX28-201ENST00000332395 EPN2O95208 641 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 ANXA4P09525 319 aaPredicted RBP16.78■□□□□ 0.28
DDX28-201ENST00000332395 ENGP17813 658 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 CDH2P19022 906 aaPredicted RBP16.78■□□□□ 0.28
DDX28-201ENST00000332395 ASMTP46597 345 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 PNLIPRP1P54315 467 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 RPS13P62277 151 aaKnown RBP16.78■□□□□ 0.28
DDX28-201ENST00000332395 SPIN4Q56A73 249 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 CES5AQ6NT32 575 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 SVOPLQ8N434 492 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 GPR156Q8NFN8 814 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 CHTF18Q8WVB6 975 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 SUSD6Q92537 303 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 TMIGD2Q96BF3 282 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 PYURFQ96I23 114 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 SFXN1Q9H9B4 322 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 GPR34Q9UPC5 381 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 BTBD3Q9Y2F9 522 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 COL4A3Q01955 1670 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 C17orf113A0A1B0GUU1 675 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 TBC1D3BA6NDS4 549 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 YY2O15391 372 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 CCNDBP1O95273 360 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 CPSF4O95639 269 aaKnown RBP16.78■□□□□ 0.28
DDX28-201ENST00000332395 HOXB6P17509 224 aaKnown RBP16.78■□□□□ 0.28
DDX28-201ENST00000332395 IL12RB1P42701 662 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 MAGEA8P43361 318 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 NFE2L1Q14494 772 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 PLCL1Q15111 1095 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 ZCCHC8Q6NZY4 707 aaKnown RBP16.78■□□□□ 0.28
DDX28-201ENST00000332395 ADHFE1Q8IWW8 467 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 ZCCHC7Q8N3Z6 543 aaKnown RBP16.78■□□□□ 0.28
DDX28-201ENST00000332395 LMNTD1Q8N9Z9 388 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 CXorf40AQ8TE69 158 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 SH3KBP1Q96B97 665 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 REPS1Q96D71 796 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 SAMD11Q96NU1 681 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 DUSP26Q9BV47 211 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 SGPP1Q9BX95 441 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 AASDHPPTQ9NRN7 309 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 DYRK1BQ9Y463 629 aa16.78■□□□□ 0.28
DDX28-201ENST00000332395 DENND4AQ7Z401 1863 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 ANTXRLA6NF34 631 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 VEGFDO43915 354 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 GPX2P18283 190 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 P2RY2P41231 377 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 TAP2Q03519 686 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 VAC14Q08AM6 782 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 PDGFRLQ15198 375 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 HKDC1Q2TB90 917 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 DSG4Q86SJ6 1040 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 HS3ST5Q8IZT8 346 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 OR10Q1Q8NGQ4 319 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 OR2L2Q8NH16 312 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 WDR34Q96EX3 536 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 RDH12Q96NR8 316 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms