RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 MAN1A2O60476 641 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 SLC25A12O75746 678 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 ANXA9O76027 345 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 NDST3O95803 873 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 RBP3P10745 1247 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 NME2P22392 152 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 PDHA2P29803 388 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 GRIA3P42263 894 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 PRLHRP49683 370 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 RUNX1T1Q06455 604 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 KIR2DS3Q14952 304 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 RPS6KA1Q15418 735 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 BTBD16Q32M84 506 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 CMPK2Q5EBM0 449 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 SEL1L2Q5TEA6 688 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 ARHGAP11AQ6P4F7 1023 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 TMEM205Q6UW68 189 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 ZNF662Q6ZS27 426 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 YTHDF3Q7Z739 585 aaKnown RBP13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 POGLUT1Q8NBL1 392 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 OR5AR1Q8NGP9 310 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 ZNF592Q92610 1267 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 ALG3Q92685 438 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 NPAS2Q99743 824 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 Q9UFV3 132 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 RSPH14Q9UHP6 348 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 GABRR3A8MPY1 467 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 FFAR3O14843 346 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 GPR42O15529 346 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 HS6ST1O60243 411 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 EPOP01588 193 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 GEMP55040 296 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 WASHC5Q12768 1159 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 WASHC2DQ5SRD0 308 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 CATSPEREQ5SY80 951 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 PLAG1Q6DJT9 500 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 WDR53Q7Z5U6 358 aaPredicted RBP13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 HES6Q96HZ4 224 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 FCRL5Q96RD9 977 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 TTYH2Q9BSA4 534 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 FSD1LQ9BXM9 530 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 TRABDQ9H4I3 376 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 KCNK13Q9HB14 408 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 LZTFL1Q9NQ48 299 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 TRPC4Q9UBN4 977 aa13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 PACSIN2Q9UNF0 486 aaPredicted RBP13.92□□□□□ -0.18
CTHRC1-201ENST00000330295 SYT5O00445 386 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 SMPD2O60906 423 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 SEC24DO94855 1032 aaPredicted RBP13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 TPBGLP0DKB5 382 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 NFKB1P19838 968 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 RBL1P28749 1068 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 WNT3AP56704 352 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 VSX2P58304 361 aaPredicted RBP13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 MPP3Q13368 585 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 ZNF658BQ4V348 819 aaPredicted RBP13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 ULK2Q8IYT8 1036 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 ZNF567Q8N184 647 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 TRIM58Q8NG06 486 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 SPATA22Q8NHS9 363 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 ZNF398Q8TD17 642 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 YIPF2Q9BWQ6 316 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 FRMD8P1Q9BZ68 369 aaPredicted RBP13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 HACD3Q9P035 362 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 AAR2Q9Y312 384 aaKnown RBP13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 CAPN6Q9Y6Q1 641 aa13.91□□□□□ -0.18
CTHRC1-201ENST00000330295 C8orf89P0DMQ9 161 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 GLI4P10075 376 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 TACR1P25103 407 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 ACVR2AP27037 513 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 RFC3P40938 356 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 EFNA3P52797 238 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 RPA4Q13156 261 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 FAM182AQ5T1J6 154 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 ZNF449Q6P9G9 518 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 B3GNT6Q6ZMB0 384 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 TMEM125Q96AQ2 219 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 TADA1Q96BN2 335 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 DCUN1D1Q96GG9 259 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 TGIF2Q9GZN2 237 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 GBA3Q9H227 469 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 UBP1Q9NZI7 540 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 STOX2Q9P2F5 926 aaPredicted RBP13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 PLAGL1Q9UM63 463 aa13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 TDRKHQ9Y2W6 561 aaKnown RBP13.9□□□□□ -0.18
CTHRC1-201ENST00000330295 IGHV3-20A0A0C4DH32 117 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 A0A0U1RQJ8 604 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 BUD23O43709 281 aaKnown RBP13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 SRPX2O60687 465 aaPredicted RBP13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 PDE9AO76083 593 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 RALBP11234 206 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 EPXP11678 715 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 CD68P34810 354 aaPredicted RBP13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 KRTAP1-1Q07627 177 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 MUM1Q2TAK8 710 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 GXYLT1Q4G148 440 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 FIGLAQ6QHK4 219 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 IPMKQ8NFU5 416 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 MAIP1Q8WWC4 291 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms