RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 COMTD1Q86VU5 262 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 TMEM199Q8N511 208 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 OR52E4Q8NGH9 312 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 RDH12Q96NR8 316 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 AMBNQ9NP70 447 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 FZD10Q9ULW2 581 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 NPIPA5E9PKD4 350 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 HTR1AP08908 422 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 FAM84AQ96KN4 292 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 MS4A12Q9NXJ0 267 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 NPIPA1Q9UND3 350 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 MEGF6O75095 1541 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 SMIM35A0A1B0GVV1 85 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 AGPSO00116 658 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 NARSO43776 548 aaKnown RBP16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 PLA2G16P53816 162 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 ZNF423Q2M1K9 1284 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 EIF5A2Q9GZV4 153 aaKnown RBP16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 ADAMTS10Q9H324 1103 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 AKTIPQ9H8T0 292 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 ZNF226Q9NYT6 803 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 NKX1-2Q9UD57 310 aaPredicted RBP16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 TLR6Q9Y2C9 796 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 SH2B3Q9UQQ2 575 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 AGAP5A6NIR3 686 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 MT-CYBP00156 380 aaPredicted RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 CDH11P55287 796 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 DSC3Q14574 896 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 COL28A1Q2UY09 1125 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 ALG10BQ5I7T1 473 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 ZNF514Q96K75 400 aaPredicted RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 CGREF1Q99674 301 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 CD84Q9UIB8 345 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 FBP2O00757 339 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 IL3P08700 152 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 TACR2P21452 398 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 ECM1Q16610 540 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 ZNF367Q7RTV3 350 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 GID4Q8IVV7 300 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 PNPLA2Q96AD5 504 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 PKP4Q99569 1192 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 ADGRB1O14514 1584 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 SLIT3O75094 1523 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 J3QRK9 145 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 AGTR1P30556 359 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 FNTBP49356 437 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 FBXL8Q96CD0 374 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 ELOVL2Q9NXB9 296 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 A0A1W2PRB8 838 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 J3QLW9 94 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 SAP18O00422 153 aaKnown RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 BCAS2O75934 225 aaPredicted RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 ZNF19P17023 458 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 EFNA1P20827 205 aaPredicted RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 RFTN1Q14699 578 aaPredicted RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 FIBCD1Q8N539 461 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 FBXO15Q8NCQ5 510 aaPredicted RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 BIRC8Q96P09 236 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 B3GAT2Q9NPZ5 323 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 ARFGEF2Q9Y6D5 1785 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 GABRR2P28476 465 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 DRAXINQ8NBI3 349 aaPredicted RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 ARL5AQ9Y689 179 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 H0YAE9 185 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 RPP14O95059 124 aaKnown RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 GLUD1P00367 558 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 ADH6P28332 368 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 APOBEC3HQ6NTF7 200 aaKnown RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 CXCL17Q6UXB2 119 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 GPAT4Q86UL3 456 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 OR10A4Q9H209 315 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 UNKLQ9H9P5 680 aaKnown RBP16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 SERINC1Q9NRX5 453 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 TAS2R9Q9NYW1 312 aa16.43■□□□□ 0.22
SMCHD1-201ENST00000320876 NUP205Q92621 2012 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 CHMP24386 653 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.42■□□□□ 0.223e-7■■■□□ 17.1
SMCHD1-201ENST00000320876 ERMP1Q7Z2K6 904 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 MFSD2AQ8NA29 543 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 EMID1Q96A84 441 aaPredicted RBP16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 ORAI3Q9BRQ5 295 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 UCK2Q9BZX2 261 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 ITM2CQ9NQX7 267 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 BTBD19C9JJ37 291 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 CTBP2P56545 445 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 PIAS4Q8N2W9 510 aaPredicted RBP16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 FANK1Q8TC84 345 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 CD47Q08722 323 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 CTC1Q2NKJ3 1217 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 FAM163AQ96GL9 167 aaPredicted RBP16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 HAPLN3Q96S86 360 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 FBXL3Q9UKT7 428 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 RFPL1O75677 317 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 ELP5Q8TE02 316 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 NINJ1Q92982 152 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 BORCS8Q96FH0 119 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 ZFP37Q9Y6Q3 630 aaPredicted RBP16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 MSL3P1P0C860 447 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 GLP1RP43220 463 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms